RNA id: TU255976



Basic Information


Item Value
RNA id TU255976
length 220
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G223924
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 11104090 ~ 11108240 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


acccaatacaggactacacaacccaatacaggacaacacaacacaatacaggactacacaacacaatacaggactacacaacacaacacaggacaacacaatacaggacaacacaacccaatacaggactacacaacacaatacaggacaacacaacccaatacaggactacacaacccaatacaggacaacacaactcactacaggactacacaacaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU255964 lncRNA downstream 14532 11089346 ~ 11089558 (-) True G223919
TU255957 lncRNA downstream 24557 11078727 ~ 11079533 (-) True znf628
TU255948 lncRNA downstream 38485 11061915 ~ 11065605 (-) True LOC110520907
TU255935 lncRNA downstream 64353 11038462 ~ 11039737 (-) False G223898
TU255936 lncRNA downstream 64861 11038746 ~ 11039229 (-) True G223898
TU256005 lncRNA upstream 70215 11178455 ~ 11179883 (-) True G223950
TU256004 lncRNA upstream 108325 11216565 ~ 11224830 (-) True G223949
TU256047 lncRNA upstream 167677 11275917 ~ 11278628 (-) False G223969
TU256048 lncRNA upstream 167677 11275917 ~ 11278628 (-) True G223969
TU256879 lncRNA upstream 238421 11346661 ~ 11353026 (-) True G224676
XM_021589998.2 mRNA downstream 16961 11079975 ~ 11087129 (-) True LOC110509048
XM_036968745.1 mRNA downstream 18616 11079975 ~ 11085474 (-) False LOC110509048
XM_021590011.2 mRNA downstream 24520 11068525 ~ 11079570 (-) False znf628
LOC110520907 mRNA downstream 37117 11065489 ~ 11066973 (-) False LOC110520907
LOC110520834 mRNA downstream 49920 11051867 ~ 11054170 (-) True LOC110520834
XM_036968754.1 mRNA upstream 43156 11151396 ~ 11164970 (-) True rasip1
XM_021590085.2 mRNA upstream 250773 11359013 ~ 11363845 (-) True LOC110509113
XM_021590107.2 mRNA upstream 257183 11365423 ~ 11368231 (-) True LOC110509134
XM_036968814.1 mRNA upstream 262392 11370632 ~ 11386718 (-) True LOC110510606
XM_021590140.2 mRNA upstream 316553 11424793 ~ 11432989 (-) True styk1b
TU255954 other downstream 30340 11070946 ~ 11073750 (-) False znf628
TU254793 other downstream 1080887 10020648 ~ 10023203 (-) False LOC110508724
TU254794 other downstream 1080905 10020648 ~ 10023185 (-) True LOC110508724
TU254805 other downstream 1089198 10012961 ~ 10014892 (-) True G223070
TU254786 other downstream 1101196 10001415 ~ 10002894 (-) False LOC110508696
TU255996 other upstream 63880 11172120 ~ 11174367 (-) True G223942
TU256045 other upstream 167677 11275917 ~ 11278628 (-) False G223969
TU257101 other upstream 619122 11727362 ~ 11741584 (-) True LOC110509576
TU257113 other upstream 644611 11752851 ~ 11753680 (-) False G224869
TU257114 other upstream 644611 11752851 ~ 11753680 (-) False G224869

Expression Profile