Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU258602 |
| length | 723 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G226067 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 12971101 ~ 12971823 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU258589 | lncRNA | downstream | 13422 | 12957443 ~ 12957679 (-) | True | G226055 |
| TU258551 | lncRNA | downstream | 58969 | 12911470 ~ 12912132 (-) | True | G226019 |
| TU257816 | lncRNA | downstream | 123406 | 12847436 ~ 12847695 (-) | True | G225391 |
| TU257787 | lncRNA | downstream | 127202 | 12841311 ~ 12843899 (-) | True | G225370 |
| TU257757 | lncRNA | downstream | 147972 | 12820328 ~ 12823129 (-) | True | G225368 |
| TU258600 | lncRNA | upstream | 735 | 12972558 ~ 12985792 (-) | True | G226065 |
| TU258647 | lncRNA | upstream | 62750 | 13034573 ~ 13036569 (-) | True | G226106 |
| TU258664 | lncRNA | upstream | 87111 | 13058934 ~ 13059167 (-) | True | G226123 |
| TU258667 | lncRNA | upstream | 96471 | 13068294 ~ 13068594 (-) | True | G226126 |
| TU258731 | lncRNA | upstream | 209165 | 13180988 ~ 13181291 (-) | False | G226188 |
| XM_021581457.2 | mRNA | downstream | 42037 | 12925454 ~ 12929064 (-) | False | cxcr3.1 |
| NM_001124423.1 | mRNA | downstream | 42100 | 12925622 ~ 12929001 (-) | True | cxcr3.1 |
| LOC110503616 | mRNA | downstream | 88085 | 12880885 ~ 12883016 (-) | True | LOC110503616 |
| XM_021591169.2 | mRNA | downstream | 95413 | 12864942 ~ 12875688 (-) | True | tlr21 |
| XM_021591157.2 | mRNA | downstream | 110512 | 12856694 ~ 12860589 (-) | True | LOC110509927 |
| XM_021591500.2 | mRNA | upstream | 367370 | 13339193 ~ 13341845 (-) | False | LOC110510146 |
| XM_021591509.2 | mRNA | upstream | 367962 | 13339785 ~ 13341845 (-) | True | LOC110510146 |
| XM_036969665.1 | mRNA | upstream | 374286 | 13346109 ~ 13347872 (-) | True | LOC110510138 |
| LOC110503661 | mRNA | upstream | 388059 | 13359882 ~ 13360962 (-) | True | LOC110503661 |
| XM_021591465.2 | mRNA | upstream | 405032 | 13376855 ~ 13378759 (-) | True | LOC110510120 |
| TU257501 | other | downstream | 498041 | 12472299 ~ 12473060 (-) | True | G225171 |
| TU257449 | other | downstream | 513310 | 12454388 ~ 12457791 (-) | True | G225127 |
| TU257419 | other | downstream | 630135 | 12336241 ~ 12340966 (-) | True | G225099 |
| TU257266 | other | downstream | 889868 | 12071287 ~ 12081233 (-) | True | G224988 |
| TU257215 | other | downstream | 955000 | 12014926 ~ 12016101 (-) | True | G224954 |
| TU258665 | other | upstream | 95050 | 13066873 ~ 13067357 (-) | True | G226124 |
| TU258728 | other | upstream | 205355 | 13177178 ~ 13180272 (-) | True | G226187 |
| TU258769 | other | upstream | 252061 | 13223884 ~ 13224515 (-) | True | G226224 |
| TU258842 | other | upstream | 372251 | 13344074 ~ 13344375 (-) | True | G226294 |
| TU259125 | other | upstream | 954851 | 13926674 ~ 13927833 (-) | True | wu:fe05a04 |
