Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU258667 |
| length | 301 |
| lncRNA type | intronic |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G226126 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 13068294 ~ 13068594 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU258664 | lncRNA | downstream | 9127 | 13058934 ~ 13059167 (-) | True | G226123 |
| TU258647 | lncRNA | downstream | 31725 | 13034573 ~ 13036569 (-) | True | G226106 |
| TU258600 | lncRNA | downstream | 82502 | 12972558 ~ 12985792 (-) | True | G226065 |
| TU258602 | lncRNA | downstream | 96471 | 12971101 ~ 12971823 (-) | True | G226067 |
| TU258589 | lncRNA | downstream | 110615 | 12957443 ~ 12957679 (-) | True | G226055 |
| TU258731 | lncRNA | upstream | 112394 | 13180988 ~ 13181291 (-) | False | G226188 |
| TU258732 | lncRNA | upstream | 112394 | 13180988 ~ 13181809 (-) | False | G226188 |
| TU258729 | lncRNA | upstream | 112418 | 13181012 ~ 13181291 (-) | True | G226188 |
| TU258753 | lncRNA | upstream | 119305 | 13187899 ~ 13188419 (-) | True | G226208 |
| TU258754 | lncRNA | upstream | 120195 | 13188789 ~ 13189160 (-) | True | G226209 |
| XM_021581457.2 | mRNA | downstream | 139230 | 12925454 ~ 12929064 (-) | False | cxcr3.1 |
| NM_001124423.1 | mRNA | downstream | 139293 | 12925622 ~ 12929001 (-) | True | cxcr3.1 |
| LOC110503616 | mRNA | downstream | 185278 | 12880885 ~ 12883016 (-) | True | LOC110503616 |
| XM_021591169.2 | mRNA | downstream | 192606 | 12864942 ~ 12875688 (-) | True | tlr21 |
| XM_021591157.2 | mRNA | downstream | 207705 | 12856694 ~ 12860589 (-) | True | LOC110509927 |
| XM_021591500.2 | mRNA | upstream | 270599 | 13339193 ~ 13341845 (-) | False | LOC110510146 |
| XM_021591509.2 | mRNA | upstream | 271191 | 13339785 ~ 13341845 (-) | True | LOC110510146 |
| XM_036969665.1 | mRNA | upstream | 277515 | 13346109 ~ 13347872 (-) | True | LOC110510138 |
| LOC110503661 | mRNA | upstream | 291288 | 13359882 ~ 13360962 (-) | True | LOC110503661 |
| XM_021591465.2 | mRNA | upstream | 308261 | 13376855 ~ 13378759 (-) | True | LOC110510120 |
| TU258665 | other | downstream | 937 | 13066873 ~ 13067357 (-) | True | G226124 |
| TU257501 | other | downstream | 595234 | 12472299 ~ 12473060 (-) | True | G225171 |
| TU257449 | other | downstream | 610503 | 12454388 ~ 12457791 (-) | True | G225127 |
| TU257419 | other | downstream | 727328 | 12336241 ~ 12340966 (-) | True | G225099 |
| TU257266 | other | downstream | 987061 | 12071287 ~ 12081233 (-) | True | G224988 |
| TU258728 | other | upstream | 108584 | 13177178 ~ 13180272 (-) | True | G226187 |
| TU258769 | other | upstream | 155290 | 13223884 ~ 13224515 (-) | True | G226224 |
| TU258842 | other | upstream | 275480 | 13344074 ~ 13344375 (-) | True | G226294 |
| TU259125 | other | upstream | 858080 | 13926674 ~ 13927833 (-) | True | wu:fe05a04 |
| TU259117 | other | upstream | 931142 | 13999736 ~ 14001808 (-) | True | LOC110538195 |
