Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU260677 |
| length | 393 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G227881 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 15491365 ~ 15505385 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU260621 | lncRNA | upstream | 28433 | 15457908 ~ 15462932 (+) | True | G227846 |
| TU260619 | lncRNA | upstream | 31735 | 15454545 ~ 15459630 (+) | True | G227845 |
| TU260616 | lncRNA | upstream | 37835 | 15448516 ~ 15453530 (+) | False | G227844 |
| TU260618 | lncRNA | upstream | 37835 | 15448516 ~ 15453530 (+) | True | G227844 |
| TU260571 | lncRNA | upstream | 49867 | 15396902 ~ 15441498 (+) | True | G227808 |
| TU260708 | lncRNA | downstream | 34951 | 15540336 ~ 15540824 (+) | True | G227911 |
| TU260761 | lncRNA | downstream | 121079 | 15626464 ~ 15628330 (+) | True | G227963 |
| TU260760 | lncRNA | downstream | 123043 | 15628428 ~ 15628719 (+) | True | G227962 |
| TU260770 | lncRNA | downstream | 147213 | 15652598 ~ 15702948 (+) | True | G227971 |
| TU260706 | lncRNA | downstream | 206202 | 15711587 ~ 15712119 (+) | True | LOC110503805 |
| XM_021596792.2 | mRNA | upstream | 101281 | 15372460 ~ 15390084 (+) | False | ncam3 |
| XM_021596790.2 | mRNA | upstream | 101281 | 15372461 ~ 15390084 (+) | False | ncam3 |
| XM_021596791.2 | mRNA | upstream | 101281 | 15372463 ~ 15390084 (+) | True | ncam3 |
| XM_021596789.2 | mRNA | upstream | 158399 | 15328444 ~ 15332966 (+) | False | sult2st3 |
| XM_036970322.1 | mRNA | downstream | 49365 | 15554750 ~ 15577232 (+) | False | rbm42 |
| XM_021592776.2 | mRNA | downstream | 60680 | 15566065 ~ 15577232 (+) | False | rbm42 |
| XM_036970319.1 | mRNA | downstream | 60785 | 15566170 ~ 15577801 (+) | True | rbm42 |
| XM_036970308.1 | mRNA | downstream | 73027 | 15578412 ~ 15619099 (+) | False | arhgap33 |
| XM_036970309.1 | mRNA | downstream | 73028 | 15578413 ~ 15619099 (+) | True | arhgap33 |
| TU260351 | other | upstream | 247083 | 15243946 ~ 15244282 (+) | True | G227606 |
| TU260267 | other | upstream | 395452 | 15073144 ~ 15095913 (+) | True | LOC110511049 |
| TU260122 | other | upstream | 493290 | 14997159 ~ 14998075 (+) | False | G227405 |
| TU260123 | other | upstream | 493290 | 14997159 ~ 14998075 (+) | True | G227405 |
| TU260067 | other | upstream | 500071 | 14990520 ~ 14991294 (+) | True | LOC110510950 |
| TU260768 | other | downstream | 182958 | 15688343 ~ 15696644 (+) | True | zgc:162160 |
| TU261485 | other | downstream | 1008118 | 16513503 ~ 16515893 (+) | True | LOC118944532 |
| TU261556 | other | downstream | 1137966 | 16643351 ~ 16647584 (+) | True | LOC110503770 |
| TU261452 | other | downstream | 1289314 | 16794699 ~ 16798932 (+) | True | LOC100653482 |
| TU264064 | other | downstream | 2789969 | 18295354 ~ 18296105 (+) | True | G230916 |
