RNA id: TCONS_00029214



Basic Information


Item Value
RNA id TCONS_00029214
length 1233
RNA type unprocessed_pseudogene
GC content 0.43
exon number 3
gene id XLOC_014804
representative True

Chromosome Information


Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 25056812 ~ 25060877 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


ATGGAGGAGAGCTTTCCTTTTCATTACTCTTTATGGGAATATCTGTTTTCTTGGGTGGGGTTGTTATTTTTCCTGCTGGATGTAGTAATGGACATCTTGACTGTTGTGTCACTTTATCAGGAGGAGAATTATGTGTCTATGGGGCTGATGATCTTTTTTCTACTGGGCTCCTCAGTGCTATTACAGATATTCAGTTGGGTCTGGTACTCTGACTCTTTGGATGAGCTTGAAACTAAGGTGGAGAaatttgcaaagaaaaaaaaattgatcaaACCATTCCACTTTCTGCAGCTTGGTGTTTACCTCAGGTATACTGGGCTGATGGAGATCTCGACGACGCATTTTTTTCGTCAAACTAATACTTTCACCGAGGGTGTAGCTGTGTATCTGAGCCATGATCTTCAGATGCTTCGTCTATTTGAGGCGTTTTCTGAAAGTGCTCCGCAGCTCATACTCATGATGACTTTAACTCTACAAAGAGGAGAGTTGGAGATTTTAACAGGTTTGAAACTCCTCTCATCAGTGGCCTCAATTGCCAGTACTGTTACCACGTACCACCGCGGCATGCGTGCTTTTCTTGAAGATAAACACAAGATGAGATGGACCTCGACTGCTTTCTACTTCCTGTGGAACTTTCTGCTGATGATTCCCCGTGTGGCCGCTCTGGCGCTCTTCTGCAGTGTATTCCCGTGCTACATCACTGCTCATTTTCTATCTTCGTGGATGGTGCTGGTTTTGGTGGCCTGGAGCCAGAAAACAGATCTAATGAAAAGTCATTGGGAATGGCTTTACAGAGCTACTGTTGGACTCATCTGGTACTTCAGCTGGTTTAACGTGTCTGAAGGAAGTATAAAATTAAAGAGTGTCGTTTATTATAGTCTCATGGGTTTGGACACGATTTTGCTGCTGGGCTTCTGGTGCTGGAAGGTGGTTGAGTATGCAGACAGTTGGAGTACGTTAAATCCTTATATAGTGGTTCCAACACTACTGGGTTTGTATGTGATTGGAATTCTAGTGGAAATAATATACTACAGATGGTTTCATCCTACCtgtgacaaaaacaaaatagctGAACCCAGTAAACCAACACCAATATTTAAAGTAGACTCAGTAGGCTTTCGCAATACGACAGACTCTGGAGACTTTGAAGGGTCGCCTGCAATTGCAGATGAAGGTCCTGCTCCACCTGTCACTGGAGCTGTCAAGAGAAGCAGGACTTTGGCTGCTAATTTC

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000032374

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00029208 lncRNA downstream 298743 24756545 ~ 24758069 (-) False XLOC_014799
TCONS_00030236 lncRNA downstream 298745 24752531 ~ 24758067 (-) False XLOC_014799
TCONS_00030235 lncRNA downstream 298745 24752531 ~ 24758067 (-) False XLOC_014799
TCONS_00029777 lncRNA downstream 368633 24686710 ~ 24688179 (-) True XLOC_014798
TCONS_00030234 lncRNA downstream 663780 24388065 ~ 24393032 (-) True XLOC_014793
TCONS_00029217 lncRNA upstream 23388 25084265 ~ 25086092 (-) False XLOC_014806
TCONS_00029216 lncRNA upstream 23388 25084265 ~ 25086092 (-) True XLOC_014806
TCONS_00029224 lncRNA upstream 51919 25112796 ~ 25114667 (-) False XLOC_014807
TCONS_00029226 lncRNA upstream 94665 25155542 ~ 25157191 (-) True XLOC_014808
TCONS_00029239 lncRNA upstream 1669421 26730298 ~ 26736346 (-) False XLOC_014818
TCONS_00029213 mRNA downstream 51203 24994270 ~ 25005609 (-) True XLOC_014803
TCONS_00029212 mRNA downstream 68172 24982672 ~ 24988640 (-) True XLOC_014802
TCONS_00029211 mRNA downstream 98419 24938136 ~ 24958393 (-) True XLOC_014801
TCONS_00029206 mRNA downstream 298703 24750466 ~ 24758109 (-) False XLOC_014799
TCONS_00029207 mRNA downstream 299581 24752951 ~ 24757231 (-) False XLOC_014799
TCONS_00029215 mRNA upstream 11176 25072053 ~ 25081711 (-) True XLOC_014805
TCONS_00029218 mRNA upstream 27273 25088150 ~ 25149077 (-) False XLOC_014807
TCONS_00029219 mRNA upstream 27273 25088150 ~ 25149598 (-) False XLOC_014807
TCONS_00029220 mRNA upstream 28362 25089239 ~ 25113660 (-) False XLOC_014807
TCONS_00029221 mRNA upstream 33925 25094802 ~ 25114701 (-) False XLOC_014807
TCONS_00029210 other downstream 299488 24757193 ~ 24757324 (-) True XLOC_014799
TCONS_00029209 other downstream 299838 24756843 ~ 24756974 (-) True XLOC_014800
TCONS_00029189 other downstream 868069 24187594 ~ 24188743 (-) True XLOC_014788
TCONS_00029188 other downstream 873921 24182775 ~ 24182891 (-) True XLOC_014787
TCONS_00029186 other downstream 916918 24139780 ~ 24139894 (-) True XLOC_014784
TCONS_00029225 other upstream 85909 25146786 ~ 25148984 (-) True XLOC_014807
TCONS_00029233 other upstream 457543 25518420 ~ 25518540 (-) True XLOC_014813
TCONS_00029249 other upstream 1767304 26828181 ~ 26837124 (-) True XLOC_014824
TCONS_00029261 other upstream 2111837 27172714 ~ 27172830 (-) True XLOC_014831
TCONS_00029268 other upstream 2273653 27334530 ~ 27336629 (-) False XLOC_014832

Expression Profile


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