RNA id: TU264626



Basic Information


Item Value
RNA id TU264626
length 638
RNA type TUCP
GC content 0.47
exon number 2
gene id G231438
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 18851249 ~ 18851982 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gctgtttttcagtctctcggtcccagctttgatgcacctgtactgacctcgccttctggatgatagcggggtgaacaggcagtggccagGCTGTGTGGCTGGCTGCAGAgccagacagagggatggagggatagggagggcGTGGGAACAGGAGCTAggcagagggatggatggagggatagggagggtgTGGGAACAGGAGCTAggcagagggatggatggagggatagggagagtgTGGGAACAGGAGCTAGGCAGAGGGATGGATGAGGGATAGTGAGGGTGTGGGAACAGGAGCTAggcagagggatggatggagggatcgGGAGAGTGTGGGAACAGGAGCTAggcagagggatggatggagggatagggagggtgTGGGAACAGGAGCTAggcagagggatggatggagggatagggagggtgTGGGAACAGGAGCTAggcagagggatggatggagggatagtgAGGGTGTGGGAACAGGAGCTAggcagagggatggatggagggatagggagggtgTGGGAACAGGAGCTAGGCAGAGggatggatggagggatagggagggtgTGGGAACAGGAGCTAggcagagggatggatggagggatagggagggtgTGGGAACAagaagatgg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU264606 lncRNA upstream 34959 18815565 ~ 18816290 (+) True G231419
TU264561 lncRNA upstream 57535 18792855 ~ 18793714 (+) True LOC110511301
TU264566 lncRNA upstream 75818 18774706 ~ 18775431 (+) False LOC110511301
TU264553 lncRNA upstream 152342 18697338 ~ 18698907 (+) True G231367
TU264550 lncRNA upstream 155091 18695903 ~ 18696158 (+) True G231366
TU264637 lncRNA downstream 12795 18864777 ~ 18865465 (+) True G231449
TU264646 lncRNA downstream 20424 18872406 ~ 18872673 (+) True G231454
TU264653 lncRNA downstream 36395 18888377 ~ 18889148 (+) True G231460
TU264658 lncRNA downstream 40694 18892676 ~ 18893090 (+) True G231464
TU264749 lncRNA downstream 167831 19019813 ~ 19021640 (+) True G231550
XM_021592246.2 mRNA upstream 24527 18819001 ~ 18826722 (+) True LOC110511248
XM_036971031.1 mRNA upstream 38203 18801968 ~ 18813046 (+) False LOC110511268
XM_036971020.1 mRNA upstream 38203 18801969 ~ 18813046 (+) False LOC110511268
XM_036971013.1 mRNA upstream 38203 18801970 ~ 18813046 (+) False LOC110511268
XM_036971012.1 mRNA upstream 38203 18801971 ~ 18813046 (+) False LOC110511268
XM_021592202.2 mRNA downstream 192325 19044307 ~ 19066203 (+) False LOC110511188
XM_021592207.2 mRNA downstream 192325 19044307 ~ 19066203 (+) True LOC110511188
XM_021592813.2 mRNA downstream 504790 19356772 ~ 19408498 (+) False LOC110512399
XM_036971061.1 mRNA downstream 504791 19356773 ~ 19408498 (+) True LOC110512399
XM_036971156.1 mRNA downstream 815616 19667598 ~ 19674027 (+) False LOC110512421
TU264434 other upstream 264408 18570009 ~ 18586841 (+) True LOC110511593
TU264064 other upstream 555144 18295354 ~ 18296105 (+) True G230916
TU261452 other upstream 2052317 16794699 ~ 16798932 (+) True LOC100653482
TU261556 other upstream 2203665 16643351 ~ 16647584 (+) True LOC110503770
TU261485 other upstream 2335356 16513503 ~ 16515893 (+) True LOC118944532
TU265246 other downstream 374384 19226366 ~ 19234295 (+) True G231983
TU265650 other downstream 975148 19827130 ~ 19844652 (+) True LOC110512505
TU266948 other downstream 1706794 20558776 ~ 20565712 (+) True G233521
TU266973 other downstream 1756311 20608293 ~ 20608725 (+) True G233545
TU267841 other downstream 2412093 21264075 ~ 21264506 (+) True G234322

Expression Profile