RNA id: TU265203


Basic Information

Item Value
RNA id TU265203
length 346
lncRNA type intronic
GC content 0.41
exon number 1
gene id G231947
representative True

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 19129706 ~ 19130051 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gtgtgtttgacagagagagtgtgtttgacagagagagtgtgtttgacagagagtgtgtttgacagagagagtgtgtttgacagagagagtgtgtctgacagagagagtgtgtttgacagagagagtgtgtctgacagagagagtgtgtttgacagagagagtgtgtttgacagatagtgtgtttgacagagagagtgtgtttgacagagagagtgtgtttgacagagagagtgtgtttgacagagagtgtgtttgacagagagagtgtgtttgacagagagtgtgtgtttgacagagagagtgtgtttgacagagagtgtgtttgacagagtGTGATCGGCCTCCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU265202 lncRNA upstream 2626 19126744 ~ 19127080 (+) True G231946
TU265200 lncRNA upstream 7282 19122211 ~ 19122424 (+) True G231944
TU265192 lncRNA upstream 25660 19103836 ~ 19104046 (+) True G231936
TU265155 lncRNA upstream 86208 19043284 ~ 19043498 (+) True G231906
TU265139 lncRNA upstream 95560 19033824 ~ 19034146 (+) True G231890
TU265205 lncRNA downstream 4112 19134163 ~ 19134805 (+) True G231949
TU265235 lncRNA downstream 78395 19208446 ~ 19214698 (+) True G231978
TU265237 lncRNA downstream 85368 19215419 ~ 19220631 (+) False G231979
TU265241 lncRNA downstream 87770 19217821 ~ 19220631 (+) False G231979
TU265243 lncRNA downstream 88201 19218252 ~ 19218483 (+) True G231980
XM_021592202.2 mRNA upstream 63503 19044307 ~ 19066203 (+) False LOC110511188
XM_021592207.2 mRNA upstream 63503 19044307 ~ 19066203 (+) True LOC110511188
XM_021592246.2 mRNA upstream 302984 18819001 ~ 18826722 (+) True LOC110511248
XM_036971012.1 mRNA upstream 316660 18801971 ~ 18813046 (+) False LOC110511268
XM_021592813.2 mRNA downstream 226721 19356772 ~ 19408498 (+) False LOC110512399
XM_036971061.1 mRNA downstream 226722 19356773 ~ 19408498 (+) True LOC110512399
XM_036971156.1 mRNA downstream 537547 19667598 ~ 19674027 (+) False LOC110512421
XM_036971169.1 mRNA downstream 537547 19667598 ~ 19674027 (+) False LOC110512421
XM_036971162.1 mRNA downstream 537796 19667847 ~ 19674027 (+) False LOC110512421
TU264626 other upstream 277724 18851249 ~ 18851982 (+) True G231438
TU264434 other upstream 542865 18570009 ~ 18586841 (+) True LOC110511593
TU264064 other upstream 833601 18295354 ~ 18296105 (+) True G230916
TU261452 other upstream 2330774 16794699 ~ 16798932 (+) True LOC100653482
TU261556 other upstream 2482122 16643351 ~ 16647584 (+) True LOC110503770
TU265246 other downstream 96315 19226366 ~ 19234295 (+) True G231983
TU265650 other downstream 697079 19827130 ~ 19844652 (+) True LOC110512505
TU266948 other downstream 1428725 20558776 ~ 20565712 (+) True G233521
TU266973 other downstream 1478242 20608293 ~ 20608725 (+) True G233545
TU267841 other downstream 2134024 21264075 ~ 21264506 (+) True G234322

Expression Profile