RNA id: TU265735


Basic Information

Item Value
RNA id TU265735
length 312
lncRNA type antisense_over
GC content 0.43
exon number 1
gene id G232414
representative True

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 19850960 ~ 19851271 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

CTATTTCTGTCTGCTGTTGTCATTCTGGAAACAAAAGAGGGAATCGGTCAGGGGATAGAATCAGGCAGTGGGTCGGGATGTAGGGGGATATCATTTTtcacaggcagttaacccactgttaggccgtcattgaaaatgagaatttgttcttaactgacttgcctggttaaataaaggtaaaataaaaaatagggaGGGGTTTGCCTGGaagggataggagagagaggctgtgtattTATTTTGGTAGGCCTATGTTGTTTTCGTACTAACGTATCTAGGGCGTATGGAGAGGGCAGTATGACAACTGTAAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU265734 lncRNA upstream 16483 19833042 ~ 19834477 (+) True G232413
TU265672 lncRNA upstream 75781 19774317 ~ 19775179 (+) True G232354
TU265673 lncRNA upstream 85791 19762720 ~ 19765169 (+) False G232355
TU265674 lncRNA upstream 85791 19762720 ~ 19765169 (+) True G232355
TU265657 lncRNA upstream 88642 19758606 ~ 19762318 (+) True LOC110503829
TU265736 lncRNA downstream 526 19851797 ~ 19852031 (+) True G232415
TU265667 lncRNA downstream 1442 19852713 ~ 19857677 (+) True LOC110512558
TU265663 lncRNA downstream 12037 19863308 ~ 19863877 (+) True LOC110512626
TU265645 lncRNA downstream 47171 19898442 ~ 19905535 (+) False G232341
TU265646 lncRNA downstream 47171 19898442 ~ 19905535 (+) False G232341
XM_036971328.1 mRNA upstream 6509 19821356 ~ 19844451 (+) False LOC110512505
XM_036971320.1 mRNA upstream 6509 19821890 ~ 19844451 (+) False LOC110512505
XM_036971287.1 mRNA upstream 31499 19802986 ~ 19819461 (+) False LOC110512494
XM_036971312.1 mRNA upstream 31499 19802986 ~ 19819461 (+) False LOC110512494
XM_036971304.1 mRNA upstream 31499 19803057 ~ 19819461 (+) False LOC110512494
XM_021592869.2 mRNA downstream 1350 19852621 ~ 19854181 (+) False LOC110512558
XM_021592877.2 mRNA downstream 1351 19852622 ~ 19857615 (+) False LOC110512558
XM_021592879.2 mRNA downstream 1351 19852622 ~ 19857615 (+) False LOC110512558
XM_021592870.2 mRNA downstream 1367 19852638 ~ 19854181 (+) False LOC110512558
XM_036971356.1 mRNA downstream 1397 19852668 ~ 19857615 (+) False LOC110512558
TU265650 other upstream 6308 19827130 ~ 19844652 (+) True LOC110512505
TU265246 other upstream 616665 19226366 ~ 19234295 (+) True G231983
TU264626 other upstream 998978 18851249 ~ 18851982 (+) True G231438
TU264434 other upstream 1264119 18570009 ~ 18586841 (+) True LOC110511593
TU264064 other upstream 1554855 18295354 ~ 18296105 (+) True G230916
TU266948 other downstream 707505 20558776 ~ 20565712 (+) True G233521
TU266973 other downstream 757022 20608293 ~ 20608725 (+) True G233545
TU267841 other downstream 1412804 21264075 ~ 21264506 (+) True G234322
TU267870 other downstream 1435455 21286726 ~ 21287002 (+) True G234340
TU268500 other downstream 2166323 22017594 ~ 22019984 (+) True kiaa0319

Expression Profile