RNA id: TU266934



Basic Information


Item Value
RNA id TU266934
length 215
RNA type TUCP
GC content 0.43
exon number 1
gene id G233513
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 20551783 ~ 20551997 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


AGGCCTTAGAGGCTTACACAGCAATGGATGAGGGGCTGTCCAACATCTACAAGGGCTTGAAGGAAGCGCTGCTGGTGAAGTTCGACATCTCCCCAGAGACCTACCGTCAACGCTTCAGAGCTGCATCGACGCCATCGGGTGAGTCGCCGACAGAGACGTACCACCGCCTTAAGGGTCTCTACCGACGATGGGATCGACCGGAGAAGACACAGGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU266912 lncRNA downstream 18287 20529880 ~ 20533496 (-) True G233491
TU266895 lncRNA downstream 43418 20506750 ~ 20508365 (-) True G233479
TU266894 lncRNA downstream 46157 20505226 ~ 20505626 (-) True G233478
TU266890 lncRNA downstream 50436 20501109 ~ 20501347 (-) True G233474
TU266891 lncRNA downstream 51374 20500147 ~ 20500409 (-) True G233475
TU266935 lncRNA upstream 218 20552215 ~ 20552450 (-) True G233514
TU267374 lncRNA upstream 102200 20654197 ~ 20654460 (-) True G233914
TU267377 lncRNA upstream 104204 20656201 ~ 20656503 (-) True G233917
TU267407 lncRNA upstream 150208 20702205 ~ 20709007 (-) True G233942
TU267420 lncRNA upstream 177825 20729822 ~ 20730058 (-) True G233955
XM_021592921.2 mRNA downstream 276475 20272374 ~ 20275308 (-) True LOC110512719
XM_021592920.2 mRNA downstream 281411 20262526 ~ 20270372 (-) True LOC110512703
XM_036971419.1 mRNA downstream 461086 20023910 ~ 20090697 (-) True dnah5
XM_021592906.2 mRNA downstream 533281 20014592 ~ 20018502 (-) False LOC110512652
XM_036963613.1 mRNA downstream 620043 19914520 ~ 19931740 (-) False g6f-like-b
XR_005039838.1 mRNA upstream 756 20552753 ~ 20554867 (-) True LOC118944500
XM_021593013.2 mRNA upstream 11651 20563648 ~ 20581532 (-) True LOC110512912
trnat-ugu-31 mRNA upstream 31283 20583280 ~ 20583352 (-) True trnat-ugu-31
XR_002471931.2 mRNA upstream 38449 20590446 ~ 20595555 (-) False LOC110512925
trnat-ugu-32 mRNA upstream 40059 20592056 ~ 20592128 (-) True trnat-ugu-32
TU266428 other downstream 795165 19756204 ~ 19756618 (-) True G233052
TU266349 other downstream 903154 19648086 ~ 19648629 (-) True G232980
TU266171 other downstream 952682 19542102 ~ 19599101 (-) False rims2a
TU265301 other downstream 1269645 19159300 ~ 19282138 (-) True LOC110511176
TU264859 other downstream 1949908 18599730 ~ 18601875 (-) True G231652
TU267325 other upstream 96774 20648771 ~ 20651696 (-) True glipr2l
TU267728 other upstream 626600 21178597 ~ 21180682 (-) False G234224
TU267729 other upstream 626600 21178597 ~ 21180097 (-) True G234224
TU268086 other upstream 893491 21445488 ~ 21455716 (-) True LOC110513321
TU268159 other upstream 917664 21469661 ~ 21469945 (-) True G234600

Expression Profile