RNA id: TU268159



Basic Information


Item Value
RNA id TU268159
length 285
RNA type TUCP
GC content 0.52
exon number 1
gene id G234600
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21469661 ~ 21469945 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tccacagaatggaatataatcacgtgctatcagaaaccactgcacttgaccccaggtttaagaagttagccttcagtgatgccagagcgattgatgaggctcttcaaagaataacctcagcagcagggagggacagccccagcagtcagcaggctcaggcaccagggcaacaggaagaagagggatcagatggagcagaagcaccagcagtagtgccacaaaCGTCTGCTGTTTGGATGCTGTTTGACGAGCGAGCAACTGGGGATACAGCACGAAGGAATCTCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU268145 lncRNA downstream 36372 21432988 ~ 21433289 (-) True G234586
TU268143 lncRNA downstream 38480 21430968 ~ 21431181 (-) True G234584
TU268140 lncRNA downstream 41287 21428109 ~ 21428374 (-) True G234581
TU268103 lncRNA downstream 80895 21375827 ~ 21388766 (-) True LOC110513307
TU268102 lncRNA downstream 94903 21374036 ~ 21374758 (-) True G234550
TU268160 lncRNA upstream 1421 21471366 ~ 21472544 (-) True G234601
TU268178 lncRNA upstream 14439 21484384 ~ 21484597 (-) True G234610
TU268181 lncRNA upstream 18148 21488093 ~ 21488380 (-) True G234613
TU268185 lncRNA upstream 23279 21493224 ~ 21493785 (-) True G234617
TU268187 lncRNA upstream 26885 21496830 ~ 21497139 (-) True G234619
LOC110503879 mRNA downstream 434 21457830 ~ 21469227 (-) True LOC110503879
XM_021593243.2 mRNA downstream 13689 21438546 ~ 21455972 (-) False LOC110513321
XM_021593235.2 mRNA downstream 14048 21438546 ~ 21455613 (-) False LOC110513321
XM_021593226.2 mRNA downstream 14049 21438546 ~ 21455612 (-) False LOC110513321
XM_021593230.2 mRNA downstream 14049 21438546 ~ 21455612 (-) False LOC110513321
XM_036971866.1 mRNA upstream 44593 21514538 ~ 21539187 (-) True LOC110503882
XM_021593273.2 mRNA upstream 81473 21551418 ~ 21587320 (-) False LOC110513430
XM_021593278.2 mRNA upstream 81473 21551418 ~ 21587320 (-) True LOC110513430
XM_021593285.2 mRNA upstream 118996 21588941 ~ 21609130 (-) False LOC110513449
XR_002471999.2 mRNA upstream 142209 21612154 ~ 21619661 (-) True LOC110513497
TU268086 other downstream 13945 21445488 ~ 21455716 (-) True LOC110513321
TU267728 other downstream 288979 21178597 ~ 21180682 (-) False G234224
TU267729 other downstream 289564 21178597 ~ 21180097 (-) True G234224
TU267325 other downstream 817965 20648771 ~ 20651696 (-) True glipr2l
TU266934 other downstream 917664 20551783 ~ 20551997 (-) True G233513
TU268194 other upstream 28463 21498408 ~ 21498832 (-) True G234621
TU268723 other upstream 268900 21738845 ~ 21743411 (-) True G235092
TU268720 other upstream 274506 21744451 ~ 21755501 (-) True LOC118946878
TU269608 other upstream 1103888 22573833 ~ 22574989 (-) True G235881
TU270901 other upstream 1687164 23157109 ~ 23189031 (-) True G237047

Expression Profile