RNA id: TU269092



Basic Information


Item Value
RNA id TU269092
length 326
lncRNA type intronic
GC content 0.38
exon number 1
gene id G235434
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 22325186 ~ 22325511 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


TCATTGATATGTTCCccaaaaaggaacatttgtagGACGATGAGTGAAAACGGGAGGAGGAATTGAAGAGCAATAAGGCAGAGAAAGATGAGCAATGAATAAACAAACTTGAACCTCCCACTCCAATTGTGGAGAAAAACCCTCCACAGAGCACTTGGCAGAAACCATAGCAACTCAAAACAATCCCTCACTAGTGTATGAAAGGTAAGGGGTTAAATGCGTATGGCCCCTGCACTGTTTGTCCATTCAAATATTAGAACATCAAACATAGCAGTGGACACACTGTTAGTCACACCATCGAGGCATAACATATTATTGATTAAATG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU269091 lncRNA upstream 185 22323590 ~ 22325001 (+) True G235433
TU269089 lncRNA upstream 1766 22322164 ~ 22323420 (+) True G235432
TU269090 lncRNA upstream 2683 22322102 ~ 22322503 (+) False G235432
TU269086 lncRNA upstream 5963 22318922 ~ 22319223 (+) True G235429
TU269085 lncRNA upstream 6449 22318536 ~ 22318737 (+) True G235428
TU269093 lncRNA downstream 902 22326413 ~ 22326875 (+) True G235435
TU269096 lncRNA downstream 5151 22330662 ~ 22330890 (+) True G235438
TU269098 lncRNA downstream 6371 22331882 ~ 22332703 (+) True G235440
TU269100 lncRNA downstream 10176 22335687 ~ 22336032 (+) True G235442
TU269109 lncRNA downstream 41329 22366840 ~ 22424106 (+) True G235450
XM_036972103.1 mRNA upstream 34996 22227628 ~ 22290190 (+) False LOC110503919
XM_036964683.1 mRNA upstream 100299 22156347 ~ 22224887 (+) True LOC118944657
XM_021582547.2 mRNA upstream 257318 22057484 ~ 22067868 (+) False LOC110503910
XM_036972102.1 mRNA upstream 267930 22051535 ~ 22057256 (+) True LOC118947026
XM_021593485.2 mRNA upstream 287696 22017998 ~ 22037490 (+) False kiaa0319
XM_021593552.2 mRNA downstream 16233 22341744 ~ 22357183 (+) False LOC110513878
XM_021593554.2 mRNA downstream 16275 22341786 ~ 22357183 (+) False LOC110513878
XM_021593551.2 mRNA downstream 16463 22341974 ~ 22357183 (+) False LOC110513878
XM_036972132.1 mRNA downstream 16463 22341974 ~ 22357183 (+) False LOC110513878
XM_036972133.1 mRNA downstream 16463 22341974 ~ 22357183 (+) False LOC110513878
TU269077 other upstream 20280 22304493 ~ 22304906 (+) True G235426
TU268551 other upstream 257106 22058542 ~ 22068080 (+) False LOC110503910
TU268548 other upstream 257106 22058679 ~ 22068080 (+) False LOC110503910
TU268500 other upstream 305202 22017594 ~ 22019984 (+) True kiaa0319
TU267870 other upstream 1038184 21286726 ~ 21287002 (+) True G234340
TU269168 other downstream 135029 22460540 ~ 22472917 (+) False LOC110514034
TU269171 other downstream 135029 22460540 ~ 22472917 (+) False LOC110514034
TU269172 other downstream 135029 22460540 ~ 22472917 (+) True LOC110514034
TU269263 other downstream 347225 22672736 ~ 22698834 (+) True G235571
TU269259 other downstream 348014 22673525 ~ 22680728 (+) False G235569

Expression Profile