RNA id: TU269100



Basic Information


Item Value
RNA id TU269100
length 346
lncRNA type antisense_over
GC content 0.36
exon number 1
gene id G235442
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 22335687 ~ 22336032 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTGGAGAGGCCATGGACATGAACATACATGTCCCCTTGTGGTCTTTTCAAAGCCATTTCTTTAACAAACTCATGAATCTCTAGGTCAATGAGGTCATTTGTTCATTGCACCGGTGCAGAGAAAGCCAGATCAATAGAATTGATCAGAGCCTTATTACTTAGCCCTATCTCCTTTCATATGCCTAAATGACCCCACTTCTGTCTCCTATCAAACCTGCATTGTCCAACCTGCATTGTTTCACTTTGACCacgcattctctctctcccactgtatTCCCTTTGTCTCCCACAATCCTCTTTCCACTTCCCCCTCAACCAATTACACCGGTATTATTTTCCACCCTTTt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU269098 lncRNA upstream 2984 22331882 ~ 22332703 (+) True G235440
TU269096 lncRNA upstream 4797 22330662 ~ 22330890 (+) True G235438
TU269093 lncRNA upstream 8812 22326413 ~ 22326875 (+) True G235435
TU269092 lncRNA upstream 10176 22325186 ~ 22325511 (+) True G235434
TU269091 lncRNA upstream 10686 22323590 ~ 22325001 (+) True G235433
TU269109 lncRNA downstream 30808 22366840 ~ 22424106 (+) True G235450
TU269146 lncRNA downstream 105793 22441825 ~ 22442083 (+) True G235484
TU269167 lncRNA downstream 121163 22457195 ~ 22459090 (+) True G235496
TU269165 lncRNA downstream 123128 22459160 ~ 22460466 (+) True G235495
TU269153 lncRNA downstream 146440 22482472 ~ 22488203 (+) True LOC118947118
XM_036972103.1 mRNA upstream 45497 22227628 ~ 22290190 (+) False LOC110503919
XM_036964683.1 mRNA upstream 110800 22156347 ~ 22224887 (+) True LOC118944657
XM_021582547.2 mRNA upstream 267819 22057484 ~ 22067868 (+) False LOC110503910
XM_036972102.1 mRNA upstream 278431 22051535 ~ 22057256 (+) True LOC118947026
XM_021593485.2 mRNA upstream 298197 22017998 ~ 22037490 (+) False kiaa0319
XM_021593552.2 mRNA downstream 5712 22341744 ~ 22357183 (+) False LOC110513878
XM_021593554.2 mRNA downstream 5754 22341786 ~ 22357183 (+) False LOC110513878
XM_021593551.2 mRNA downstream 5942 22341974 ~ 22357183 (+) False LOC110513878
XM_036972132.1 mRNA downstream 5942 22341974 ~ 22357183 (+) False LOC110513878
XM_036972133.1 mRNA downstream 5942 22341974 ~ 22357183 (+) False LOC110513878
TU269077 other upstream 30781 22304493 ~ 22304906 (+) True G235426
TU268551 other upstream 267607 22058542 ~ 22068080 (+) False LOC110503910
TU268548 other upstream 267607 22058679 ~ 22068080 (+) False LOC110503910
TU268500 other upstream 315703 22017594 ~ 22019984 (+) True kiaa0319
TU267870 other upstream 1048685 21286726 ~ 21287002 (+) True G234340
TU269168 other downstream 124508 22460540 ~ 22472917 (+) False LOC110514034
TU269171 other downstream 124508 22460540 ~ 22472917 (+) False LOC110514034
TU269172 other downstream 124508 22460540 ~ 22472917 (+) True LOC110514034
TU269263 other downstream 336704 22672736 ~ 22698834 (+) True G235571
TU269259 other downstream 337493 22673525 ~ 22680728 (+) False G235569

Expression Profile