RNA id: TCONS_00029249


Basic Information

Item Value
RNA id TCONS_00029249
length 828
RNA type processed_transcript
GC content 0.48
exon number 7
gene id XLOC_014824
representative True

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 26828181 ~ 26837124 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CTCTCTATTGCTGTAGTGGAAGATGAGGCTGATGACAGCAGTGAGGATGATGGACACCAGGCTGACACACAGACAGAGCACCCAGAAGCTTGCTGTGCTGCTTTGAAGGTACATGTGAAGGGTTGAATACACAGCGCACCACAGCACCATGTACAAAATCGGTGCCATGATGAAATTAAAAACATATGAGTTGAAAAGCAGATATCTTCTGACGGACGGATGGTCCAGCGCTAATTCAAGTGGACCCTCAAAATTATCTGCTGGGATCTGGAAGCCTTTTGTTTCCAGAAGAGTCCTGCAGCGTGAGAAGTCAAATTTAGGAGTGAACCAGGAGGACGTGGGGACTGATGCCACACACTGACCGTTCCTCCATGTGGATGATGTGCCTGGTTCTCCTGCTGTGCGTGACTGTCCTGTGGGGGATTTGCCATCAGATTTTTCCTCTCTGTTACACTGCCGCTCCCTCTCCTCCATGGTGACGGCCACTGTCAGAGCCTGCTGTGGTTCGGGCCCAGCTTGTTTCAGTTGATGATTTCGGCACAGTTCACTGTCTGCTAGCAAAACGACAGCATTCACAGCTGACTGCAGCCAATCTTAGCTTTACTAAACATCAAACACACTTTCCTCCAGAATATAGTAGTGTGTATGTGACAGCAGGTCCATCTCTTcatttctgtcattgtgtgtctctCTCAGGTCCTTCTCAGTCATGTCTGCAGTTGCCACTACCTTCTAAACTCCTCCCACTGCTTTAGCTCTCATTTTTTAAGCCCTTCATTGCCATTTATCGGGGGTTTCTCTTCATTTTAAGGTAAGACTCTTCTTGTG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000132260

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00029248 lncRNA downstream 4472 26821666 ~ 26823709 (-) True XLOC_014823
TCONS_00030237 lncRNA downstream 20962 26803869 ~ 26807219 (-) True XLOC_014822
TCONS_00029779 lncRNA downstream 39901 26786900 ~ 26788280 (-) True XLOC_014821
TCONS_00029778 lncRNA downstream 47483 26779546 ~ 26780698 (-) True XLOC_014820
TCONS_00029239 lncRNA downstream 91835 26730298 ~ 26736346 (-) False XLOC_014818
TCONS_00029254 lncRNA upstream 76300 26913424 ~ 26917550 (-) True XLOC_014826
TCONS_00029258 lncRNA upstream 154797 26991921 ~ 27006763 (-) True XLOC_014829
TCONS_00029263 lncRNA upstream 476594 27313718 ~ 27314662 (-) False XLOC_014832
TCONS_00029266 lncRNA upstream 496222 27333346 ~ 27334349 (-) False XLOC_014832
TCONS_00029277 lncRNA upstream 616428 27453552 ~ 27462782 (-) False XLOC_014835
TCONS_00029247 mRNA downstream 4534 26810208 ~ 26823647 (-) False XLOC_014823
TCONS_00029243 mRNA downstream 58098 26739813 ~ 26770083 (-) False XLOC_014819
TCONS_00029242 mRNA downstream 58098 26739813 ~ 26770083 (-) False XLOC_014819
TCONS_00029245 mRNA downstream 58263 26740510 ~ 26769918 (-) False XLOC_014819
TCONS_00029244 mRNA downstream 58314 26740510 ~ 26769867 (-) False XLOC_014819
TCONS_00029250 mRNA upstream 20915 26858039 ~ 26863626 (-) False XLOC_014825
TCONS_00029251 mRNA upstream 20915 26858039 ~ 26869103 (-) True XLOC_014825
TCONS_00029252 mRNA upstream 32304 26869428 ~ 26923957 (-) False XLOC_014826
TCONS_00029253 mRNA upstream 35561 26872685 ~ 26923273 (-) False XLOC_014826
TCONS_00029255 mRNA upstream 100419 26937543 ~ 26943936 (-) True XLOC_014827
TCONS_00029233 other downstream 1309641 25518420 ~ 25518540 (-) True XLOC_014813
TCONS_00029225 other downstream 1679197 25146786 ~ 25148984 (-) True XLOC_014807
TCONS_00029214 other downstream 1767304 25056812 ~ 25060877 (-) True XLOC_014804
TCONS_00029210 other downstream 2070857 24757193 ~ 24757324 (-) True XLOC_014799
TCONS_00029209 other downstream 2071207 24756843 ~ 24756974 (-) True XLOC_014800
TCONS_00029261 other upstream 335590 27172714 ~ 27172830 (-) True XLOC_014831
TCONS_00029268 other upstream 497406 27334530 ~ 27336629 (-) False XLOC_014832
TCONS_00029282 other upstream 627292 27464416 ~ 27464482 (-) False XLOC_014836
TCONS_00029285 other upstream 627980 27465104 ~ 27465170 (-) False XLOC_014836
TCONS_00029288 other upstream 628212 27465336 ~ 27465402 (-) False XLOC_014836

Expression Profile

//