Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU270130 |
| length | 768 |
| lncRNA type | intronic |
| GC content | 0.55 |
| exon number | 2 |
| gene id | G236356 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 23281412 ~ 23282267 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU270104 | lncRNA | upstream | 46473 | 23234719 ~ 23234939 (+) | True | G236330 |
| TU270079 | lncRNA | upstream | 71894 | 23209289 ~ 23209518 (+) | True | G236314 |
| TU270077 | lncRNA | upstream | 73197 | 23208008 ~ 23208215 (+) | True | G236312 |
| TU270074 | lncRNA | upstream | 75665 | 23205516 ~ 23205747 (+) | True | G236309 |
| TU270067 | lncRNA | upstream | 81277 | 23199884 ~ 23200135 (+) | True | G236302 |
| TU270133 | lncRNA | downstream | 15343 | 23297610 ~ 23297897 (+) | True | G236359 |
| TU270099 | lncRNA | downstream | 24588 | 23306855 ~ 23307684 (+) | True | G236325 |
| TU270138 | lncRNA | downstream | 28293 | 23310560 ~ 23310914 (+) | True | G236363 |
| TU270351 | lncRNA | downstream | 399252 | 23681519 ~ 23685244 (+) | True | LOC110514513 |
| TU270346 | lncRNA | downstream | 431108 | 23713375 ~ 23718688 (+) | False | LOC110514561 |
| XM_036972422.1 | mRNA | upstream | 53844 | 23210418 ~ 23227568 (+) | True | smarcc1a |
| XM_036972423.1 | mRNA | upstream | 55323 | 23210418 ~ 23226089 (+) | False | smarcc1a |
| XM_021593782.2 | mRNA | upstream | 148338 | 23119383 ~ 23133074 (+) | False | LOC110514335 |
| XM_036972419.1 | mRNA | upstream | 148338 | 23119383 ~ 23133074 (+) | True | LOC110514335 |
| XM_021593753.2 | mRNA | upstream | 387636 | 22869833 ~ 22893776 (+) | True | LOC110514282 |
| XM_036972443.1 | mRNA | downstream | 20505 | 23302772 ~ 23305547 (+) | False | elp6 |
| XM_021593832.2 | mRNA | downstream | 20505 | 23302772 ~ 23306081 (+) | True | elp6 |
| XM_021593838.2 | mRNA | downstream | 23965 | 23306232 ~ 23342019 (+) | False | LOC110514448 |
| XM_021593837.2 | mRNA | downstream | 30089 | 23312356 ~ 23342019 (+) | True | LOC110514448 |
| XM_021593851.2 | mRNA | downstream | 86737 | 23369004 ~ 23374440 (+) | False | LOC110514472 |
| TU270066 | other | upstream | 82337 | 23198852 ~ 23199075 (+) | True | G236301 |
| TU270030 | other | upstream | 101113 | 23149152 ~ 23180299 (+) | True | G236271 |
| TU269263 | other | upstream | 582578 | 22672736 ~ 22698834 (+) | True | G235571 |
| TU269259 | other | upstream | 600684 | 22673525 ~ 22680728 (+) | False | G235569 |
| TU269172 | other | upstream | 808495 | 22460540 ~ 22472917 (+) | True | LOC110514034 |
| TU270145 | other | downstream | 64613 | 23346880 ~ 23349378 (+) | True | G236370 |
| TU270150 | other | downstream | 67824 | 23350091 ~ 23350815 (+) | True | G236372 |
| TU270428 | other | downstream | 510530 | 23792797 ~ 23795150 (+) | False | LOC110514613 |
| TU270430 | other | downstream | 510530 | 23792797 ~ 23795195 (+) | False | LOC110514613 |
| TU270431 | other | downstream | 510530 | 23792797 ~ 23795150 (+) | False | LOC110514613 |
