RNA id: TU270619


Basic Information

Item Value
RNA id TU270619
length 305
lncRNA type inter_gene
GC content 0.57
exon number 1
gene id G236782
representative True

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 24184352 ~ 24184656 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TCTGAAAAAAGTTTTCTGGAACGTGATGTATCAGCTACGTTTGGTAAGTGACATAAAATATGGGACTGTTGAGAGAGTTGCTCATTAATTGCCAGAGATATGCGAAGTGGAGTGATCTATTCTTACTATAAGATGTCACCACATGTGCTGGTAATGCTTTGGTCATCATTATCAAGTGTTCAGATCTACTGAATTATTTTACAGCCCATAAACCTAAGCCAAATATGTTttggtttttctttagttttcaAAAATGGAAATGTTTCTAGAAATCATTTActatatcaaatcacatttaaaGCATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU270635 lncRNA upstream 81997 24102140 ~ 24102355 (+) True G236798
TU270597 lncRNA upstream 83494 24065964 ~ 24100858 (+) False G236762
TU270598 lncRNA upstream 115854 24065964 ~ 24068498 (+) True G236762
TU270586 lncRNA upstream 131229 24052892 ~ 24053123 (+) True G236752
TU270577 lncRNA upstream 152504 24031635 ~ 24031848 (+) True G236743
TU270683 lncRNA downstream 30725 24215381 ~ 24215807 (+) True G236838
TU270687 lncRNA downstream 37617 24222273 ~ 24222648 (+) True G236842
TU270689 lncRNA downstream 39323 24223979 ~ 24224206 (+) True G236844
TU270614 lncRNA downstream 74427 24259083 ~ 24261294 (+) True LOC110514864
TU270716 lncRNA downstream 107341 24291997 ~ 24292241 (+) True G236871
XM_036972730.1 mRNA upstream 96 24105516 ~ 24184256 (+) False LOC110503950
XM_036972719.1 mRNA upstream 96 24105517 ~ 24184256 (+) False LOC110503950
XM_036972757.1 mRNA upstream 96 24105517 ~ 24184256 (+) False LOC110503950
XM_036972767.1 mRNA upstream 96 24105517 ~ 24184256 (+) False LOC110503950
XM_036972785.1 mRNA upstream 96 24105517 ~ 24184256 (+) False LOC110503950
XR_005041909.1 mRNA downstream 19827 24204483 ~ 24207629 (+) True LOC110505138
XM_021594024.2 mRNA downstream 42256 24226912 ~ 24259547 (+) False LOC110514864
XM_036972869.1 mRNA downstream 42256 24226912 ~ 24259547 (+) False LOC110514864
XM_036972877.1 mRNA downstream 42256 24226912 ~ 24259547 (+) False LOC110514864
XM_021594059.2 mRNA downstream 115051 24299707 ~ 24313412 (+) False LOC110514930
TU270587 other upstream 128685 24055319 ~ 24055667 (+) True G236753
TU270506 other upstream 255265 23908750 ~ 23929087 (+) True LOC110514733
TU270430 other upstream 389157 23792797 ~ 23795195 (+) False LOC110514613
TU271992 other downstream 564749 24749405 ~ 24750383 (+) True G238034
TU272005 other downstream 581010 24765666 ~ 24766363 (+) True G238047
TU272008 other downstream 590623 24775279 ~ 24775945 (+) True G238050
TU272577 other downstream 1010631 25195287 ~ 25199234 (+) True G238540
TU273162 other downstream 1356113 25540769 ~ 25541613 (+) True G239026

Expression Profile