Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU272873 |
| length | 227 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 1 |
| gene id | G238798 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 25377475 ~ 25377701 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU272872 | lncRNA | downstream | 2008 | 25375261 ~ 25375467 (-) | True | G238797 |
| TU272868 | lncRNA | downstream | 4735 | 25372479 ~ 25372740 (-) | True | G238793 |
| TU272866 | lncRNA | downstream | 6561 | 25370622 ~ 25370914 (-) | True | G238791 |
| TU272781 | lncRNA | downstream | 41666 | 25333951 ~ 25335809 (-) | False | G238712 |
| TU272877 | lncRNA | upstream | 3820 | 25381521 ~ 25381751 (-) | True | G238802 |
| TU272891 | lncRNA | upstream | 14703 | 25392404 ~ 25392630 (-) | True | G238816 |
| TU272998 | lncRNA | upstream | 86525 | 25464226 ~ 25464547 (-) | True | G238922 |
| TU273187 | lncRNA | upstream | 163173 | 25540874 ~ 25541404 (-) | True | G239050 |
| TU273272 | lncRNA | upstream | 199519 | 25577220 ~ 25578695 (-) | True | G239133 |
| XM_021594320.2 | mRNA | downstream | 140939 | 25171287 ~ 25236536 (-) | False | LOC110515384 |
| XM_021594305.2 | mRNA | downstream | 140940 | 25171287 ~ 25236535 (-) | False | LOC110515384 |
| XM_021594312.2 | mRNA | downstream | 140940 | 25171287 ~ 25236535 (-) | False | LOC110515384 |
| XM_036973147.1 | mRNA | downstream | 140940 | 25171287 ~ 25236535 (-) | False | LOC110515384 |
| XM_036973057.1 | mRNA | downstream | 252033 | 25119183 ~ 25125442 (-) | True | notchl |
| XM_036973180.1 | mRNA | upstream | 88150 | 25465851 ~ 25510719 (-) | False | LOC110515443 |
| XM_036973239.1 | mRNA | upstream | 88150 | 25465851 ~ 25510720 (-) | False | LOC110515443 |
| XM_036973179.1 | mRNA | upstream | 88150 | 25465851 ~ 25521829 (-) | False | LOC110515443 |
| XM_036973181.1 | mRNA | upstream | 88150 | 25465851 ~ 25521829 (-) | False | LOC110515443 |
| XM_036973182.1 | mRNA | upstream | 88150 | 25465851 ~ 25521829 (-) | False | LOC110515443 |
| TU272614 | other | downstream | 141108 | 25199088 ~ 25236367 (-) | True | LOC110515384 |
| TU272446 | other | downstream | 411267 | 24936516 ~ 24966208 (-) | False | LOC110515208 |
| TU272443 | other | downstream | 425293 | 24936667 ~ 24952182 (-) | False | LOC110515208 |
| TU272445 | other | downstream | 430470 | 24937629 ~ 24947005 (-) | True | LOC110515208 |
| TU272241 | other | downstream | 607152 | 24769704 ~ 24770323 (-) | True | LOC110515154 |
| TU273578 | other | upstream | 445655 | 25823356 ~ 25824757 (-) | True | LOC110515750 |
| TU274740 | other | upstream | 1191400 | 26569101 ~ 26569522 (-) | True | G240409 |
| TU274804 | other | upstream | 1296891 | 26674592 ~ 26675033 (-) | True | G240464 |
| TU275014 | other | upstream | 1693354 | 27071055 ~ 27075883 (-) | False | LOC110516631 |
| TU275018 | other | upstream | 1700338 | 27078039 ~ 27079944 (-) | False | LOC110516631 |
