RNA id: TU274803



Basic Information


Item Value
RNA id TU274803
length 274
lncRNA type antisense_over
GC content 0.37
exon number 1
gene id G240463
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 26670628 ~ 26670901 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GCTTCTTGAAGAGTTTACGGAAATCCTCATTGCGCTGTTTATAAGTGGGACTGAGAACCTGAGAGAGAAAGATTACTTTGTTGCTGTTCTATGCTTTATCAAATATAATCTTGCAGAACCCGTCGTGTCTATGAatattgtatatacagtggggagaacaagtatttgatacactgccgattttgcaggttttcctacttacaaagcatgtagaggtctgtaatttttatcataggtacacttcaactgtgagagacggaatctaaaaaaaaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU274798 lncRNA downstream 3299 26667059 ~ 26667329 (-) True G240458
TU274796 lncRNA downstream 6561 26662995 ~ 26664067 (-) True G240456
TU274772 lncRNA downstream 11280 26659071 ~ 26659348 (-) True G240438
TU274789 lncRNA downstream 32253 26638162 ~ 26638375 (-) True G240450
TU274780 lncRNA downstream 40544 26628274 ~ 26630084 (-) False G240445
TU274815 lncRNA upstream 28380 26699281 ~ 26699605 (-) True G240472
TU274842 lncRNA upstream 91812 26762713 ~ 26763620 (-) True G240497
TU274869 lncRNA upstream 114524 26785425 ~ 26828419 (-) True G240519
TU274931 lncRNA upstream 186168 26857069 ~ 26857277 (-) True G240574
TU274936 lncRNA upstream 190861 26861762 ~ 26861967 (-) True G240579
XM_021594792.2 mRNA downstream 20638 26647025 ~ 26649990 (-) True LOC110516273
XM_021584202.2 mRNA downstream 33479 26636727 ~ 26637149 (-) True LOC110505173
XM_021594761.2 mRNA downstream 48830 26608152 ~ 26621798 (-) False LOC110516190
XM_021594751.2 mRNA downstream 48833 26608152 ~ 26621795 (-) False LOC110516190
XM_021594796.2 mRNA upstream 20837 26691738 ~ 26715464 (-) False LOC110516285
XM_021594801.2 mRNA upstream 20837 26691738 ~ 26715464 (-) True LOC110516285
XM_021584224.2 mRNA upstream 58173 26729074 ~ 26736469 (-) True LOC110505184
XM_021594818.2 mRNA upstream 141565 26812466 ~ 26817929 (-) True LOC110516341
XM_021594832.2 mRNA upstream 160275 26831176 ~ 26851721 (-) False LOC110516351
TU274740 other downstream 101106 26569101 ~ 26569522 (-) True G240409
TU273578 other downstream 845871 25823356 ~ 25824757 (-) True LOC110515750
TU272614 other downstream 1434261 25199088 ~ 25236367 (-) True LOC110515384
TU272443 other downstream 1718446 24936667 ~ 24952182 (-) False LOC110515208
TU274804 other upstream 3691 26674592 ~ 26675033 (-) True G240464
TU275014 other upstream 400154 27071055 ~ 27075883 (-) False LOC110516631
TU275018 other upstream 407138 27078039 ~ 27079944 (-) False LOC110516631
TU275019 other upstream 413439 27084340 ~ 27085060 (-) True LOC110516631
TU274911 other upstream 441281 27112182 ~ 27112622 (-) True LOC110516667

Expression Profile