RNA id: TU274869


Basic Information

Item Value
RNA id TU274869
length 185
lncRNA type read_through
GC content 0.59
exon number 2
gene id G240519
representative True

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 26785425 ~ 26828419 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggggggggcagacagagagcaaagagagaaaggggaagttCCGATGGCGACTGAGGCTATTGTCCCATTCTGACAGACACTCTGGGCAGAGAGACACTTCCAAGGGGAGGGGTCCACCAGGCCTGGCGGACAGGGGCTCGGACCAATCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU274842 lncRNA downstream 21805 26762713 ~ 26763620 (-) True G240497
TU274815 lncRNA downstream 85820 26699281 ~ 26699605 (-) True G240472
TU274803 lncRNA downstream 114524 26670628 ~ 26670901 (-) True G240463
TU274798 lncRNA downstream 118096 26667059 ~ 26667329 (-) True G240458
TU274796 lncRNA downstream 121358 26662995 ~ 26664067 (-) True G240456
TU274931 lncRNA upstream 28650 26857069 ~ 26857277 (-) True G240574
TU274936 lncRNA upstream 33343 26861762 ~ 26861967 (-) True G240579
TU274948 lncRNA upstream 45706 26874125 ~ 26874648 (-) True G240588
TU274950 lncRNA upstream 48817 26877236 ~ 26878016 (-) True G240590
TU274966 lncRNA upstream 61457 26889876 ~ 26891172 (-) False G240601
XM_021584224.2 mRNA downstream 48956 26729074 ~ 26736469 (-) True LOC110505184
XM_021594796.2 mRNA downstream 69961 26691738 ~ 26715464 (-) False LOC110516285
XM_021594801.2 mRNA downstream 69961 26691738 ~ 26715464 (-) True LOC110516285
XM_021594792.2 mRNA downstream 135435 26647025 ~ 26649990 (-) True LOC110516273
XM_021584202.2 mRNA downstream 148276 26636727 ~ 26637149 (-) True LOC110505173
XM_021594832.2 mRNA upstream 2757 26831176 ~ 26851721 (-) False LOC110516351
XM_021594836.2 mRNA upstream 2757 26831176 ~ 26851721 (-) False LOC110516351
XM_036973677.1 mRNA upstream 2757 26831176 ~ 26851723 (-) False LOC110516351
XM_036973676.1 mRNA upstream 2757 26831176 ~ 26881008 (-) False LOC110516351
XM_036973675.1 mRNA upstream 2757 26831176 ~ 26881042 (-) True LOC110516351
TU274804 other downstream 110392 26674592 ~ 26675033 (-) True G240464
TU274740 other downstream 215903 26569101 ~ 26569522 (-) True G240409
TU273578 other downstream 960668 25823356 ~ 25824757 (-) True LOC110515750
TU272614 other downstream 1549058 25199088 ~ 25236367 (-) True LOC110515384
TU272445 other downstream 1838420 24937629 ~ 24947005 (-) True LOC110515208
TU275014 other upstream 242636 27071055 ~ 27075883 (-) False LOC110516631
TU275018 other upstream 249620 27078039 ~ 27079944 (-) False LOC110516631
TU275019 other upstream 255921 27084340 ~ 27085060 (-) True LOC110516631
TU274911 other upstream 283763 27112182 ~ 27112622 (-) True LOC110516667
TU275055 other upstream 327149 27155568 ~ 27158664 (-) True LOC110516678

Expression Profile