Item | Value |
---|---|
RNA id | TU278516 |
length | 212 |
lncRNA type | inter_gene |
GC content | 0.34 |
exon number | 2 |
gene id | G243928 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 29746781 ~ 29748615 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
species | rainbow trout (Oncorhynchus mykiss) |
29,745,200
29,745,600
29,746,000
29,746,400
29,746,800
29,747,200
29,747,600
29,748,000
29,748,400
29,748,800
29,749,200
29,749,600
29,750,000
29,750,400
29,750,800
29,751,200
29,751,600
29,752,000
29,752,400
29,752,800
NC_048567.1
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU278252 | lncRNA | downstream | 79882 | 29666663 ~ 29666899 (-) | True | G243678 |
TU278139 | lncRNA | downstream | 218155 | 29528391 ~ 29528626 (-) | True | G243568 |
TU278068 | lncRNA | downstream | 333797 | 29412197 ~ 29412984 (-) | True | stk40 |
TU277878 | lncRNA | downstream | 355938 | 29390588 ~ 29390843 (-) | True | G243330 |
TU277870 | lncRNA | downstream | 360086 | 29381626 ~ 29386695 (-) | True | G243322 |
TU278662 | lncRNA | upstream | 199318 | 29947933 ~ 29948274 (-) | True | G244069 |
TU278684 | lncRNA | upstream | 223137 | 29971752 ~ 29972079 (-) | True | G244091 |
TU278744 | lncRNA | upstream | 263851 | 30012466 ~ 30012683 (-) | True | G244151 |
TU278749 | lncRNA | upstream | 266263 | 30014878 ~ 30015090 (-) | True | G244156 |
TU278750 | lncRNA | upstream | 266602 | 30015217 ~ 30015427 (-) | True | G244157 |
XM_021595537.2 | mRNA | downstream | 249901 | 29495265 ~ 29496880 (-) | True | LOC110517512 |
XM_021581429.2 | mRNA | downstream | 259303 | 29476499 ~ 29487478 (-) | True | csf3r |
XM_021581433.2 | mRNA | downstream | 259342 | 29476499 ~ 29487439 (-) | False | csf3r |
NM_001124402.1 | mRNA | downstream | 259359 | 29476326 ~ 29487422 (-) | False | csf3r |
XM_021581424.2 | mRNA | downstream | 263034 | 29476256 ~ 29483747 (-) | False | csf3r |
XM_021595539.2 | mRNA | upstream | 30460 | 29779075 ~ 29901161 (-) | True | LOC110517528 |
XM_021595555.2 | mRNA | upstream | 380638 | 30129253 ~ 30138701 (-) | False | LOC110517552 |
XM_021595551.2 | mRNA | upstream | 380638 | 30129253 ~ 30138702 (-) | False | LOC110517552 |
XM_036973792.1 | mRNA | upstream | 380638 | 30129253 ~ 30138703 (-) | True | LOC110517552 |
XM_021595595.2 | mRNA | upstream | 474646 | 30223261 ~ 30249900 (-) | True | LOC110517624 |
TU278065 | other | downstream | 288735 | 29456481 ~ 29458046 (-) | True | LOC110517486 |
TU277694 | other | downstream | 594152 | 29132316 ~ 29152629 (-) | True | G243154 |
TU277309 | other | downstream | 800489 | 28945741 ~ 28946292 (-) | True | G242796 |
TU277105 | other | downstream | 960503 | 28781600 ~ 28786278 (-) | False | LOC110517244 |
TU277045 | other | downstream | 1016406 | 28726970 ~ 28730375 (-) | True | G242539 |
TU278954 | other | upstream | 340228 | 30088843 ~ 30129214 (-) | True | G244338 |
TU278995 | other | upstream | 425398 | 30174013 ~ 30177408 (-) | True | G244379 |
TU278997 | other | upstream | 450617 | 30199232 ~ 30199770 (-) | True | G244381 |
TU279011 | other | upstream | 462955 | 30211570 ~ 30217589 (-) | False | G244393 |
TU279014 | other | upstream | 462955 | 30211570 ~ 30217112 (-) | False | G244393 |