Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU281388 |
| length | 292 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G246558 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 32057315 ~ 32062006 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU281344 | lncRNA | downstream | 27531 | 32029578 ~ 32029784 (-) | True | G246515 |
| TU281331 | lncRNA | downstream | 32807 | 32022333 ~ 32024508 (-) | True | G246506 |
| TU281318 | lncRNA | downstream | 49386 | 32007101 ~ 32007929 (-) | False | G246502 |
| TU281321 | lncRNA | downstream | 49768 | 32007101 ~ 32007547 (-) | True | G246502 |
| TU281230 | lncRNA | downstream | 52983 | 31914252 ~ 32004332 (-) | False | LOC110518398 |
| TU281709 | lncRNA | upstream | 53195 | 32115201 ~ 32115436 (-) | True | G246859 |
| TU281799 | lncRNA | upstream | 179397 | 32241403 ~ 32243273 (-) | True | LOC110518433 |
| TU281785 | lncRNA | upstream | 221017 | 32283023 ~ 32287624 (-) | True | macf1b |
| TU281932 | lncRNA | upstream | 402987 | 32464993 ~ 32465246 (-) | True | G247070 |
| TU281934 | lncRNA | upstream | 405727 | 32467733 ~ 32468547 (-) | True | G247072 |
| XR_005043233.1 | mRNA | downstream | 52959 | 31960043 ~ 32004356 (-) | False | LOC110518398 |
| XR_005043227.1 | mRNA | downstream | 52959 | 31974357 ~ 32004356 (-) | False | LOC110518398 |
| XR_005043155.1 | mRNA | downstream | 426208 | 31562384 ~ 31631107 (-) | False | LOC110518371 |
| XR_005043161.1 | mRNA | downstream | 426208 | 31562384 ~ 31631107 (-) | False | LOC110518371 |
| XM_036973844.1 | mRNA | downstream | 476112 | 31562384 ~ 31581203 (-) | False | LOC110518371 |
| XM_021596037.2 | mRNA | upstream | 179661 | 32241667 ~ 32246399 (-) | False | LOC110518433 |
| XM_036973845.1 | mRNA | upstream | 179661 | 32241667 ~ 32246402 (-) | False | LOC110518433 |
| XM_036973878.1 | mRNA | upstream | 192740 | 32254746 ~ 32287276 (-) | False | macf1b |
| XM_036973877.1 | mRNA | upstream | 192740 | 32254746 ~ 32287991 (-) | False | macf1b |
| XM_036973880.1 | mRNA | upstream | 192740 | 32254746 ~ 32287991 (-) | False | macf1b |
| TU280776 | other | downstream | 476113 | 31562545 ~ 31581202 (-) | False | LOC110518371 |
| TU280109 | other | downstream | 1111472 | 30944953 ~ 30945843 (-) | True | G245366 |
| TU279011 | other | downstream | 1839726 | 30211570 ~ 30217589 (-) | False | G244393 |
| TU279014 | other | downstream | 1840203 | 30211570 ~ 30217112 (-) | False | G244393 |
| TU278997 | other | downstream | 1857545 | 30199232 ~ 30199770 (-) | True | G244381 |
| TU283202 | other | upstream | 1357423 | 33419429 ~ 33419707 (-) | True | G248239 |
| TU284611 | other | upstream | 2295269 | 34357275 ~ 34359451 (-) | True | G249485 |
| TU285130 | other | upstream | 2827500 | 34889506 ~ 34889954 (-) | True | G249978 |
| TU285142 | other | upstream | 2833952 | 34895958 ~ 34896296 (-) | True | G249990 |
| TU286719 | other | upstream | 4078106 | 36140112 ~ 36144572 (-) | True | G251462 |
