RNA id: TU282933



Basic Information


Item Value
RNA id TU282933
length 206
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G247986
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 33206684 ~ 33206889 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tatatatacagtgagtgcaaataaggtcaaataagggagttaaggcaataaataggccatggtggcaaagtaattacaatatagcaattacacactggaatggtagatgtgcaaaagatggatgtgcaagtagagatactgtggtgcaaaaggagccaaataaataaatacagtataggaatgaggtagatagatgggctgtatac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU282589 lncRNA upstream 212667 32991994 ~ 32994017 (+) True G247682
TU282587 lncRNA upstream 213044 32978569 ~ 32993640 (+) True G247681
TU282585 lncRNA upstream 214236 32977545 ~ 32992448 (+) False G247680
TU282586 lncRNA upstream 214236 32977545 ~ 32992448 (+) True G247680
TU282484 lncRNA upstream 314247 32892193 ~ 32892437 (+) True G247580
TU282940 lncRNA downstream 4678 33211567 ~ 33211936 (+) True G247993
TU282953 lncRNA downstream 10220 33217109 ~ 33217352 (+) True G248006
TU282954 lncRNA downstream 10574 33217463 ~ 33217694 (+) True G248007
TU282963 lncRNA downstream 22815 33229704 ~ 33230060 (+) True G248016
TU282975 lncRNA downstream 37166 33244055 ~ 33244261 (+) True G248028
XM_036973900.1 mRNA upstream 33969 33086509 ~ 33172715 (+) False LOC110518871
XM_021596255.2 mRNA upstream 33969 33087703 ~ 33172715 (+) True LOC110518871
XM_036973897.1 mRNA upstream 138073 33057896 ~ 33068611 (+) False LOC110518846
XM_036973898.1 mRNA upstream 138073 33057899 ~ 33068611 (+) False LOC110518846
XM_036973899.1 mRNA upstream 138073 33057899 ~ 33068611 (+) True LOC110518846
XM_021596277.2 mRNA downstream 134478 33341367 ~ 33344522 (+) True tpbgb
XM_036973902.1 mRNA downstream 194961 33401850 ~ 33442072 (+) False LOC110518918
XM_021596291.2 mRNA downstream 195005 33401894 ~ 33442072 (+) False LOC110518918
XM_021596298.2 mRNA downstream 195005 33401894 ~ 33442072 (+) False LOC110518918
XM_021596303.2 mRNA downstream 195005 33401894 ~ 33442072 (+) False LOC110518918
TU282359 other upstream 430897 32771770 ~ 32775787 (+) False LOC110518733
TU281088 other upstream 1347365 31852668 ~ 31859319 (+) True G246282
TU280718 other upstream 1526044 31669958 ~ 31680640 (+) True G245930
TU280571 other upstream 1581641 31542653 ~ 31625043 (+) False G245799
TU279568 other upstream 2080417 31125406 ~ 31126267 (+) False LOC110518266
TU283088 other downstream 216900 33423789 ~ 33424103 (+) True G248134
TU283767 other downstream 621331 33828220 ~ 33835275 (+) False G248750
TU283768 other downstream 621331 33828220 ~ 33835275 (+) True G248750
TU283831 other downstream 767587 33974476 ~ 33977835 (+) True G248794
TU283840 other downstream 799269 34006158 ~ 34013057 (+) True G248795

Expression Profile