RNA id: TU286266



Basic Information


Item Value
RNA id TU286266
length 217
lncRNA type inter_gene
GC content 0.32
exon number 2
gene id G251044
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 35727815 ~ 35742651 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggaaaaatcgaaaaaaaaatcgggaaaaatcggaaaaaaaatcggaaaaaaatcgggaaaaatcggaaaaaaaatcgggaaaaaatcggggaaaaatcgggaaaaatcgggaaaaaaatcggaaaaaaatcgggaaaaaatcgggaaaaaatcggaaaaaaaagcggaaaaaaattcggaaaaaatcgtgaaaaatcggaaaaaatcggggaaaaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU286264 lncRNA downstream 3613 35723189 ~ 35724202 (-) True G251042
TU286186 lncRNA downstream 50879 35672274 ~ 35676936 (-) True G250969
TU286178 lncRNA downstream 57928 35669508 ~ 35669887 (-) True G250964
TU286120 lncRNA downstream 136547 35590963 ~ 35591268 (-) True G250911
TU286115 lncRNA downstream 142309 35585260 ~ 35585506 (-) True G250906
TU286272 lncRNA upstream 2288 35744939 ~ 35802618 (-) False G251048
TU286271 lncRNA upstream 4264 35746915 ~ 35802618 (-) True G251048
TU286281 lncRNA upstream 73987 35816638 ~ 35817284 (-) True G251057
TU286283 lncRNA upstream 76849 35819500 ~ 35819713 (-) True G251059
TU286297 lncRNA upstream 81081 35823732 ~ 35877946 (-) False G251068
XM_021596617.1 mRNA downstream 524872 35176253 ~ 35202943 (-) False si:dkey-34d22.1
XM_021596651.2 mRNA upstream 360192 36102843 ~ 36109189 (-) False LOC110519653
XM_036973959.1 mRNA upstream 369536 36112187 ~ 36116920 (-) False stmn1b
XM_036973958.1 mRNA upstream 369536 36112187 ~ 36117544 (-) True stmn1b
LOC110519907 mRNA upstream 693730 36436381 ~ 36437754 (-) True LOC110519907
XM_036964824.1 mRNA upstream 744224 36486875 ~ 36505339 (-) True LOC110504056
TU285142 other downstream 831519 34895958 ~ 34896296 (-) True G249990
TU285130 other downstream 837861 34889506 ~ 34889954 (-) True G249978
TU284611 other downstream 1368364 34357275 ~ 34359451 (-) True G249485
TU283202 other downstream 2308108 33419429 ~ 33419707 (-) True G248239
TU280776 other downstream 4146613 31562545 ~ 31581202 (-) False LOC110518371
TU286719 other upstream 397461 36140112 ~ 36144572 (-) True G251462
TU286962 other upstream 614832 36357483 ~ 36357971 (-) True G251681
TU287636 other upstream 989194 36731845 ~ 36733440 (-) True gpatch3
TU291417 other upstream 3656610 39399261 ~ 39508702 (-) True LOC110519955
TU291595 other upstream 3901920 39644571 ~ 39645743 (-) True G255911

Expression Profile