Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU289270 |
| length | 393 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 1 |
| gene id | G253836 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 38092403 ~ 38092795 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU289246 | lncRNA | downstream | 13229 | 38078925 ~ 38079174 (-) | True | G253812 |
| TU289227 | lncRNA | downstream | 25964 | 38066224 ~ 38066439 (-) | True | G253793 |
| TU288824 | lncRNA | downstream | 285556 | 37806618 ~ 37806847 (-) | True | G253400 |
| TU288769 | lncRNA | downstream | 319229 | 37772862 ~ 37773174 (-) | True | G253345 |
| TU288764 | lncRNA | downstream | 322440 | 37769712 ~ 37769963 (-) | True | G253340 |
| TU289299 | lncRNA | upstream | 14540 | 38107335 ~ 38107740 (-) | True | G253863 |
| TU289320 | lncRNA | upstream | 34869 | 38127664 ~ 38127874 (-) | True | G253884 |
| TU289322 | lncRNA | upstream | 35982 | 38128777 ~ 38128979 (-) | True | G253886 |
| TU289342 | lncRNA | upstream | 46161 | 38138956 ~ 38139207 (-) | True | G253906 |
| TU289344 | lncRNA | upstream | 47257 | 38140052 ~ 38140274 (-) | True | G253908 |
| XM_036974000.1 | mRNA | downstream | 29647 | 37814709 ~ 38062756 (-) | False | LOC110519943 |
| XM_036974001.1 | mRNA | downstream | 29647 | 37814709 ~ 38062756 (-) | False | LOC110519943 |
| XM_036974002.1 | mRNA | downstream | 29647 | 37814709 ~ 38062756 (-) | False | LOC110519943 |
| XM_036974003.1 | mRNA | downstream | 29647 | 37814709 ~ 38062756 (-) | True | LOC110519943 |
| XR_005039852.1 | mRNA | downstream | 400398 | 37688775 ~ 37692005 (-) | False | LOC118944514 |
| XM_021596836.2 | mRNA | upstream | 171003 | 38263798 ~ 38401288 (-) | False | LOC110519945 |
| LOC110519947 | mRNA | upstream | 684143 | 38776938 ~ 38778156 (-) | False | LOC110519947 |
| XM_036974019.1 | mRNA | upstream | 702898 | 38795693 ~ 39140087 (-) | False | LOC110519948 |
| XM_036974061.1 | mRNA | upstream | 702898 | 38795693 ~ 39140087 (-) | False | LOC110519948 |
| XM_036974062.1 | mRNA | upstream | 702898 | 38795693 ~ 39140087 (-) | False | LOC110519948 |
| TU287636 | other | downstream | 1358963 | 36731845 ~ 36733440 (-) | True | gpatch3 |
| TU286962 | other | downstream | 1734432 | 36357483 ~ 36357971 (-) | True | G251681 |
| TU286719 | other | downstream | 1947831 | 36140112 ~ 36144572 (-) | True | G251462 |
| TU285142 | other | downstream | 3196107 | 34895958 ~ 34896296 (-) | True | G249990 |
| TU285130 | other | downstream | 3202449 | 34889506 ~ 34889954 (-) | True | G249978 |
| TU291417 | other | upstream | 1306466 | 39399261 ~ 39508702 (-) | True | LOC110519955 |
| TU291595 | other | upstream | 1551776 | 39644571 ~ 39645743 (-) | True | G255911 |
| TU291727 | other | upstream | 1725853 | 39818648 ~ 39818980 (-) | True | G256016 |
| TU292346 | other | upstream | 2229711 | 40322506 ~ 40322898 (-) | True | G256616 |
| TU292362 | other | upstream | 2242415 | 40335210 ~ 40335440 (-) | True | G256632 |
