Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU289399 |
| length | 209 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G253963 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 38174507 ~ 38174715 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU289385 | lncRNA | downstream | 9542 | 38164644 ~ 38164965 (-) | True | G253949 |
| TU289352 | lncRNA | downstream | 29282 | 38145016 ~ 38145225 (-) | True | G253916 |
| TU289346 | lncRNA | downstream | 32960 | 38141310 ~ 38141547 (-) | True | G253910 |
| TU289345 | lncRNA | downstream | 33550 | 38140499 ~ 38140957 (-) | True | G253909 |
| TU289344 | lncRNA | downstream | 34233 | 38140052 ~ 38140274 (-) | True | G253908 |
| TU289408 | lncRNA | upstream | 4277 | 38178992 ~ 38179243 (-) | True | G253972 |
| TU289445 | lncRNA | upstream | 31875 | 38206590 ~ 38206808 (-) | True | G254009 |
| TU289674 | lncRNA | upstream | 89118 | 38263833 ~ 38269212 (-) | False | LOC110519945 |
| TU289675 | lncRNA | upstream | 89118 | 38263833 ~ 38269212 (-) | True | LOC110519945 |
| TU289721 | lncRNA | upstream | 164754 | 38339469 ~ 38339726 (-) | True | G254275 |
| XM_036974000.1 | mRNA | downstream | 111751 | 37814709 ~ 38062756 (-) | False | LOC110519943 |
| XM_036974001.1 | mRNA | downstream | 111751 | 37814709 ~ 38062756 (-) | False | LOC110519943 |
| XM_036974002.1 | mRNA | downstream | 111751 | 37814709 ~ 38062756 (-) | False | LOC110519943 |
| XM_036974003.1 | mRNA | downstream | 111751 | 37814709 ~ 38062756 (-) | True | LOC110519943 |
| XR_005039852.1 | mRNA | downstream | 482502 | 37688775 ~ 37692005 (-) | False | LOC118944514 |
| XM_021596836.2 | mRNA | upstream | 89083 | 38263798 ~ 38401288 (-) | False | LOC110519945 |
| LOC110519947 | mRNA | upstream | 602223 | 38776938 ~ 38778156 (-) | False | LOC110519947 |
| XM_036974019.1 | mRNA | upstream | 620978 | 38795693 ~ 39140087 (-) | False | LOC110519948 |
| XM_036974061.1 | mRNA | upstream | 620978 | 38795693 ~ 39140087 (-) | False | LOC110519948 |
| XM_036974062.1 | mRNA | upstream | 620978 | 38795693 ~ 39140087 (-) | False | LOC110519948 |
| TU287636 | other | downstream | 1441067 | 36731845 ~ 36733440 (-) | True | gpatch3 |
| TU286962 | other | downstream | 1816536 | 36357483 ~ 36357971 (-) | True | G251681 |
| TU286719 | other | downstream | 2029935 | 36140112 ~ 36144572 (-) | True | G251462 |
| TU285142 | other | downstream | 3278211 | 34895958 ~ 34896296 (-) | True | G249990 |
| TU285130 | other | downstream | 3284553 | 34889506 ~ 34889954 (-) | True | G249978 |
| TU291417 | other | upstream | 1224546 | 39399261 ~ 39508702 (-) | True | LOC110519955 |
| TU291595 | other | upstream | 1469856 | 39644571 ~ 39645743 (-) | True | G255911 |
| TU291727 | other | upstream | 1643933 | 39818648 ~ 39818980 (-) | True | G256016 |
| TU292346 | other | upstream | 2147791 | 40322506 ~ 40322898 (-) | True | G256616 |
| TU292362 | other | upstream | 2160495 | 40335210 ~ 40335440 (-) | True | G256632 |
