Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00029339 |
| length | 749 |
| RNA type | nonsense_mediated_decay |
| GC content | 0.48 |
| exon number | 5 |
| gene id | XLOC_014868 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007130.7 |
| NCBI id | CM002903.2 |
| chromosome length | 48449771 |
| location | 29861859 ~ 29887629 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006606 | protein import into nucleus | biological_process |
| GO:0015031 | protein transport | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0061608 | nuclear import signal receptor activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-130530-626 | Predicted to enable nuclear import signal receptor activity. Predicted to act upstream of or within protein import into nucleus. Predicted to be located in cytoplasm. Orthologous to human KPNA6 (karyopherin subunit alpha 6). |
| ensembl_id | ENSDART00000167630 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00029335 | lncRNA | downstream | 29040 | 29822504 ~ 29832819 (-) | False | XLOC_014866 |
| TCONS_00029336 | lncRNA | downstream | 29041 | 29829985 ~ 29832818 (-) | True | XLOC_014866 |
| TCONS_00030285 | lncRNA | downstream | 65571 | 29750328 ~ 29796288 (-) | True | XLOC_014864 |
| TCONS_00030284 | lncRNA | downstream | 107491 | 29750328 ~ 29754368 (-) | False | XLOC_014864 |
| TCONS_00030283 | lncRNA | downstream | 110192 | 29750328 ~ 29751667 (-) | False | XLOC_014864 |
| TCONS_00030286 | lncRNA | upstream | 41234 | 29914349 ~ 29915967 (-) | True | XLOC_014869 |
| TCONS_00029341 | lncRNA | upstream | 274255 | 30147370 ~ 30276212 (-) | False | XLOC_014870 |
| TCONS_00029789 | lncRNA | upstream | 274275 | 30147390 ~ 30230981 (-) | False | XLOC_014870 |
| TCONS_00029790 | lncRNA | upstream | 357630 | 30230745 ~ 30300852 (-) | False | XLOC_014870 |
| TCONS_00030287 | lncRNA | upstream | 357665 | 30230780 ~ 30272896 (-) | False | XLOC_014870 |
| TCONS_00029337 | mRNA | downstream | 8424 | 29834440 ~ 29853435 (-) | False | XLOC_014867 |
| TCONS_00029338 | mRNA | downstream | 8457 | 29836458 ~ 29853402 (-) | True | XLOC_014867 |
| TCONS_00029334 | mRNA | downstream | 28983 | 29822500 ~ 29832876 (-) | False | XLOC_014866 |
| TCONS_00029331 | mRNA | downstream | 424750 | 29383486 ~ 29437109 (-) | False | XLOC_014863 |
| TCONS_00029332 | mRNA | downstream | 424751 | 29390638 ~ 29437108 (-) | True | XLOC_014863 |
| TCONS_00029344 | mRNA | upstream | 477473 | 30350588 ~ 30359059 (-) | True | XLOC_014872 |
| TCONS_00029345 | mRNA | upstream | 527257 | 30400372 ~ 30403922 (-) | False | XLOC_014873 |
| TCONS_00029346 | mRNA | upstream | 528429 | 30401544 ~ 30404096 (-) | True | XLOC_014873 |
| TCONS_00029347 | mRNA | upstream | 535202 | 30408317 ~ 30417140 (-) | False | XLOC_014874 |
| TCONS_00029348 | mRNA | upstream | 536766 | 30409881 ~ 30422239 (-) | False | XLOC_014874 |
| TCONS_00029333 | other | downstream | 76647 | 29785095 ~ 29785212 (-) | True | XLOC_014865 |
| TCONS_00029320 | other | downstream | 1419899 | 28441841 ~ 28441960 (-) | True | XLOC_014853 |
| TCONS_00029305 | other | downstream | 2256119 | 27589335 ~ 27605740 (-) | True | XLOC_014843 |
| TCONS_00029303 | other | downstream | 2277122 | 27581750 ~ 27584737 (-) | True | XLOC_014841 |
| TCONS_00029297 | other | downstream | 2286765 | 27571706 ~ 27575094 (-) | True | XLOC_014839 |
| TCONS_00029343 | other | upstream | 476188 | 30349303 ~ 30350198 (-) | False | XLOC_014872 |
| TCONS_00029352 | other | upstream | 556217 | 30429332 ~ 30431750 (-) | False | XLOC_014875 |
| TCONS_00029367 | other | upstream | 879694 | 30752809 ~ 30799963 (-) | True | XLOC_014881 |
| TCONS_00029373 | other | upstream | 1126718 | 30999833 ~ 31007417 (-) | False | XLOC_014886 |
| TCONS_00029380 | other | upstream | 1206211 | 31079326 ~ 31081251 (-) | False | XLOC_014888 |
