Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU305566 |
| length | 378 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G268939 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 50322769 ~ 50323146 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU305565 | lncRNA | upstream | 227 | 50321487 ~ 50322542 (+) | True | G268938 |
| TU305597 | lncRNA | upstream | 10038 | 50312512 ~ 50312731 (+) | True | G268970 |
| TU305583 | lncRNA | upstream | 29876 | 50292685 ~ 50292893 (+) | True | G268956 |
| TU305504 | lncRNA | upstream | 90079 | 50232471 ~ 50232690 (+) | True | G268877 |
| TU305379 | lncRNA | upstream | 181855 | 50139433 ~ 50140914 (+) | True | hoxd12a |
| TU305563 | lncRNA | downstream | 136 | 50323282 ~ 50324581 (+) | True | G268936 |
| TU305568 | lncRNA | downstream | 1537 | 50324683 ~ 50324958 (+) | True | G268941 |
| TU305602 | lncRNA | downstream | 11416 | 50334562 ~ 50336340 (+) | False | LOC110520136 |
| TU305607 | lncRNA | downstream | 11498 | 50334644 ~ 50336340 (+) | False | LOC110520136 |
| TU305604 | lncRNA | downstream | 11584 | 50334730 ~ 50336340 (+) | True | LOC110520136 |
| XM_021597222.2 | mRNA | upstream | 1475 | 50316070 ~ 50321294 (+) | True | LOC110520134 |
| XM_021597221.2 | mRNA | upstream | 2568 | 50316070 ~ 50320201 (+) | False | LOC110520134 |
| XM_021584398.2 | mRNA | upstream | 134075 | 50187165 ~ 50188694 (+) | True | LOC110505268 |
| XM_021597216.2 | mRNA | upstream | 138442 | 50175117 ~ 50184327 (+) | False | hoxd3a |
| XR_002472946.2 | mRNA | downstream | 11154 | 50334300 ~ 50335908 (+) | False | LOC110520136 |
| XM_036974478.1 | mRNA | downstream | 15021 | 50338167 ~ 50367192 (+) | False | agps |
| XM_036974477.1 | mRNA | downstream | 15023 | 50338169 ~ 50377090 (+) | True | agps |
| XM_021597229.2 | mRNA | downstream | 131893 | 50455039 ~ 50519865 (+) | False | osbpl6 |
| XM_021597234.2 | mRNA | downstream | 131893 | 50455039 ~ 50519865 (+) | False | osbpl6 |
| TU305367 | other | upstream | 139743 | 50162301 ~ 50183026 (+) | True | hoxd3a |
| TU303972 | other | upstream | 467267 | 49836617 ~ 49855502 (+) | True | G267529 |
| TU303803 | other | upstream | 766931 | 49554498 ~ 49555838 (+) | True | G267381 |
| TU303780 | other | upstream | 810294 | 49510803 ~ 49512475 (+) | True | G267358 |
| TU300305 | other | upstream | 3490565 | 46831008 ~ 46832204 (+) | True | LOC110520046 |
| TU305730 | other | downstream | 279156 | 50602302 ~ 50604816 (+) | True | LOC110520146 |
| TU305958 | other | downstream | 575443 | 50898589 ~ 50900277 (+) | True | G269291 |
| TU307177 | other | downstream | 1250834 | 51573980 ~ 51578683 (+) | False | LOC110520169 |
| TU308945 | other | downstream | 2843806 | 53166952 ~ 53172428 (+) | True | acvr2aa |
| TU309190 | other | downstream | 2898281 | 53221427 ~ 53223265 (+) | True | LOC110520187 |
