Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU308798 |
| length | 311 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G271910 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 52639625 ~ 52639935 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU308788 | lncRNA | upstream | 4271 | 52635095 ~ 52635354 (+) | True | G271900 |
| TU308773 | lncRNA | upstream | 14277 | 52625102 ~ 52625348 (+) | True | G271885 |
| TU308766 | lncRNA | upstream | 18584 | 52620771 ~ 52621041 (+) | True | G271878 |
| TU308746 | lncRNA | upstream | 31345 | 52607822 ~ 52608280 (+) | True | G271858 |
| TU308743 | lncRNA | upstream | 33124 | 52606274 ~ 52606501 (+) | True | G271855 |
| TU308843 | lncRNA | downstream | 31453 | 52671388 ~ 52671864 (+) | True | G271955 |
| TU308876 | lncRNA | downstream | 52368 | 52692303 ~ 52695698 (+) | True | G271982 |
| TU308912 | lncRNA | downstream | 127990 | 52767925 ~ 52768246 (+) | True | G272018 |
| TU308914 | lncRNA | downstream | 129023 | 52768958 ~ 52769168 (+) | True | G272020 |
| TU308915 | lncRNA | downstream | 130064 | 52769999 ~ 52770239 (+) | True | G272021 |
| XM_021597313.2 | mRNA | upstream | 52577 | 52585011 ~ 52587048 (+) | True | LOC110520179 |
| XM_021597312.2 | mRNA | upstream | 72334 | 52508775 ~ 52567291 (+) | True | LOC110520178 |
| XM_021597311.2 | mRNA | upstream | 197016 | 52380931 ~ 52442609 (+) | False | LOC110520177 |
| XM_036974561.1 | mRNA | upstream | 197016 | 52405572 ~ 52442609 (+) | True | LOC110520177 |
| XM_021597302.2 | mRNA | upstream | 872639 | 51759256 ~ 51766986 (+) | True | LOC110520174 |
| XM_021597316.2 | mRNA | downstream | 68436 | 52708371 ~ 52760376 (+) | False | LOC110520180 |
| XM_021597315.2 | mRNA | downstream | 68464 | 52708399 ~ 52760376 (+) | False | LOC110520180 |
| XM_021597318.2 | mRNA | downstream | 70139 | 52710074 ~ 52760376 (+) | False | LOC110520180 |
| XM_021597314.2 | mRNA | downstream | 75433 | 52715368 ~ 52760376 (+) | True | LOC110520180 |
| XR_005049194.1 | mRNA | downstream | 234993 | 52874928 ~ 52942773 (+) | False | LOC110520185 |
| TU307177 | other | upstream | 1060942 | 51573980 ~ 51578683 (+) | False | LOC110520169 |
| TU305958 | other | upstream | 1739348 | 50898589 ~ 50900277 (+) | True | G269291 |
| TU305730 | other | upstream | 2034809 | 50602302 ~ 50604816 (+) | True | LOC110520146 |
| TU305367 | other | upstream | 2456599 | 50162301 ~ 50183026 (+) | True | hoxd3a |
| TU303972 | other | upstream | 2784123 | 49836617 ~ 49855502 (+) | True | G267529 |
| TU308945 | other | downstream | 527017 | 53166952 ~ 53172428 (+) | True | acvr2aa |
| TU309190 | other | downstream | 581492 | 53221427 ~ 53223265 (+) | True | LOC110520187 |
| TU309244 | other | downstream | 651395 | 53291330 ~ 53336526 (+) | False | LOC110520190 |
| TU309921 | other | downstream | 1008890 | 53648825 ~ 53652431 (+) | False | G272965 |
| TU309923 | other | downstream | 1008890 | 53648825 ~ 53652152 (+) | True | G272965 |
