Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU308912 |
| length | 322 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G272018 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 52767925 ~ 52768246 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU308876 | lncRNA | upstream | 72227 | 52692303 ~ 52695698 (+) | True | G271982 |
| TU308843 | lncRNA | upstream | 96061 | 52671388 ~ 52671864 (+) | True | G271955 |
| TU308798 | lncRNA | upstream | 127990 | 52639625 ~ 52639935 (+) | True | G271910 |
| TU308788 | lncRNA | upstream | 132571 | 52635095 ~ 52635354 (+) | True | G271900 |
| TU308773 | lncRNA | upstream | 142577 | 52625102 ~ 52625348 (+) | True | G271885 |
| TU308914 | lncRNA | downstream | 712 | 52768958 ~ 52769168 (+) | True | G272020 |
| TU308915 | lncRNA | downstream | 1753 | 52769999 ~ 52770239 (+) | True | G272021 |
| TU308917 | lncRNA | downstream | 3273 | 52771519 ~ 52771737 (+) | True | G272023 |
| TU308922 | lncRNA | downstream | 8620 | 52776866 ~ 52777730 (+) | True | G272028 |
| TU308968 | lncRNA | downstream | 58589 | 52826835 ~ 52827045 (+) | True | G272070 |
| XM_021597316.2 | mRNA | upstream | 7549 | 52708371 ~ 52760376 (+) | False | LOC110520180 |
| XM_021597315.2 | mRNA | upstream | 7549 | 52708399 ~ 52760376 (+) | False | LOC110520180 |
| XM_021597318.2 | mRNA | upstream | 7549 | 52710074 ~ 52760376 (+) | False | LOC110520180 |
| XM_021597314.2 | mRNA | upstream | 7549 | 52715368 ~ 52760376 (+) | True | LOC110520180 |
| XM_021597313.2 | mRNA | upstream | 180877 | 52585011 ~ 52587048 (+) | True | LOC110520179 |
| XR_005049194.1 | mRNA | downstream | 106682 | 52874928 ~ 52942773 (+) | False | LOC110520185 |
| XM_021597328.2 | mRNA | downstream | 356410 | 53124656 ~ 53172426 (+) | False | acvr2aa |
| XM_021597329.2 | mRNA | downstream | 356410 | 53124656 ~ 53172426 (+) | False | acvr2aa |
| XM_021597330.2 | mRNA | downstream | 406018 | 53174264 ~ 53233255 (+) | False | LOC110520187 |
| XM_021597331.2 | mRNA | downstream | 406018 | 53174264 ~ 53233255 (+) | False | LOC110520187 |
| TU307177 | other | upstream | 1189242 | 51573980 ~ 51578683 (+) | False | LOC110520169 |
| TU305958 | other | upstream | 1867648 | 50898589 ~ 50900277 (+) | True | G269291 |
| TU305730 | other | upstream | 2163109 | 50602302 ~ 50604816 (+) | True | LOC110520146 |
| TU305367 | other | upstream | 2584899 | 50162301 ~ 50183026 (+) | True | hoxd3a |
| TU303972 | other | upstream | 2912423 | 49836617 ~ 49855502 (+) | True | G267529 |
| TU308945 | other | downstream | 398706 | 53166952 ~ 53172428 (+) | True | acvr2aa |
| TU309190 | other | downstream | 453181 | 53221427 ~ 53223265 (+) | True | LOC110520187 |
| TU309244 | other | downstream | 523084 | 53291330 ~ 53336526 (+) | False | LOC110520190 |
| TU309921 | other | downstream | 880579 | 53648825 ~ 53652431 (+) | False | G272965 |
| TU309923 | other | downstream | 880579 | 53648825 ~ 53652152 (+) | True | G272965 |
