Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU309378 |
| length | 315 |
| lncRNA type | intronic |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G272463 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 52897932 ~ 52898246 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU309376 | lncRNA | downstream | 1873 | 52895397 ~ 52896059 (-) | True | G272461 |
| TU309361 | lncRNA | downstream | 19360 | 52878286 ~ 52878572 (-) | True | G272446 |
| TU309360 | lncRNA | downstream | 19831 | 52877758 ~ 52878101 (-) | True | G272445 |
| TU309332 | lncRNA | downstream | 108704 | 52789001 ~ 52789228 (-) | True | G272417 |
| TU309299 | lncRNA | downstream | 121398 | 52775593 ~ 52776534 (-) | True | G272384 |
| TU309379 | lncRNA | upstream | 136 | 52898382 ~ 52898611 (-) | True | G272464 |
| TU309385 | lncRNA | upstream | 7247 | 52905493 ~ 52905775 (-) | True | G272470 |
| TU309406 | lncRNA | upstream | 39185 | 52937431 ~ 52937699 (-) | True | G272491 |
| TU309414 | lncRNA | upstream | 49859 | 52948105 ~ 52948705 (-) | True | G272499 |
| TU309424 | lncRNA | upstream | 63319 | 52961565 ~ 52961791 (-) | True | G272509 |
| XM_021597322.2 | mRNA | downstream | 22162 | 52827783 ~ 52875770 (-) | False | zeb2a |
| XM_036974563.1 | mRNA | downstream | 22162 | 52827783 ~ 52875770 (-) | True | zeb2a |
| XM_021597320.2 | mRNA | downstream | 22163 | 52827783 ~ 52875769 (-) | False | zeb2a |
| XM_021597321.2 | mRNA | downstream | 23012 | 52827783 ~ 52874920 (-) | False | zeb2a |
| XM_021597323.2 | mRNA | downstream | 53518 | 52827783 ~ 52844414 (-) | False | zeb2a |
| XM_021597342.2 | mRNA | upstream | 486295 | 53384541 ~ 53394318 (-) | True | LOC110520193 |
| XM_021597344.2 | mRNA | upstream | 639431 | 53537677 ~ 53562438 (-) | True | LOC110520195 |
| NM_001160552.1 | mRNA | upstream | 762854 | 53661100 ~ 53663978 (-) | True | ubxd2 |
| XM_036974578.1 | mRNA | upstream | 773519 | 53671765 ~ 53746869 (-) | True | LOC110520198 |
| XM_021597349.2 | mRNA | upstream | 918865 | 53817111 ~ 53864985 (-) | True | rab3gap1 |
| TU309282 | other | downstream | 189116 | 52708183 ~ 52708816 (-) | True | LOC110520182 |
| TU307459 | other | downstream | 1297702 | 51597935 ~ 51600230 (-) | True | il1rl1 |
| TU307458 | other | downstream | 1298034 | 51597399 ~ 51599898 (-) | False | il1rl1 |
| TU307414 | other | downstream | 1423793 | 51473324 ~ 51474139 (-) | True | fgf9 |
| TU306786 | other | downstream | 1768622 | 51128440 ~ 51129310 (-) | True | LOC110520160 |
| TU309646 | other | upstream | 351680 | 53249926 ~ 53251084 (-) | True | G272713 |
| TU311493 | other | upstream | 1781672 | 54679918 ~ 54682805 (-) | True | G274344 |
| TU312299 | other | upstream | 2205248 | 55103494 ~ 55119212 (-) | True | LOC110520227 |
| TU312498 | other | upstream | 2511897 | 55410143 ~ 55411487 (-) | False | G275250 |
| TU312500 | other | upstream | 2511897 | 55410143 ~ 55411487 (-) | True | G275250 |
