Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU312490 |
| length | 357 |
| lncRNA type | inter_gene |
| GC content | 0.33 |
| exon number | 1 |
| gene id | G275243 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55397890 ~ 55398246 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
55,396,400
55,396,800
55,397,200
55,397,600
55,398,000
55,398,400
55,398,800
55,398,800
55,399,200
55,399,600
55,400,000
55,400,400
55,400,800
55,401,200
NC_048567.1
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU312488 | lncRNA | downstream | 4941 | 55392257 ~ 55392949 (-) | True | LOC110520233 |
| TU312480 | lncRNA | downstream | 10666 | 55386974 ~ 55387224 (-) | True | G275234 |
| TU312475 | lncRNA | downstream | 22371 | 55375100 ~ 55375519 (-) | True | G275229 |
| TU312426 | lncRNA | downstream | 26242 | 55367204 ~ 55371648 (-) | True | armc8 |
| TU312428 | lncRNA | downstream | 41459 | 55355925 ~ 55356431 (-) | True | G275183 |
| TU312491 | lncRNA | upstream | 1557 | 55399803 ~ 55400473 (-) | True | G275244 |
| TU312495 | lncRNA | upstream | 6230 | 55404476 ~ 55404714 (-) | True | G275248 |
| TU312496 | lncRNA | upstream | 7259 | 55405505 ~ 55405705 (-) | True | G275249 |
| TU312499 | lncRNA | upstream | 11897 | 55410143 ~ 55411487 (-) | False | G275250 |
| TU312502 | lncRNA | upstream | 14551 | 55412797 ~ 55413164 (-) | True | G275252 |
| XM_036974634.1 | mRNA | downstream | 2887 | 55392189 ~ 55395003 (-) | False | LOC110520233 |
| XM_021584437.2 | mRNA | downstream | 6558 | 55389101 ~ 55391332 (-) | True | crygs2 |
| XM_021597399.2 | mRNA | downstream | 15729 | 55375915 ~ 55382161 (-) | True | LOC110520232 |
| XM_036974626.1 | mRNA | downstream | 26223 | 55357367 ~ 55371667 (-) | False | armc8 |
| XM_036974642.1 | mRNA | upstream | 194118 | 55592364 ~ 55715785 (-) | True | LOC110504309 |
| XM_021597405.2 | mRNA | upstream | 381257 | 55779503 ~ 55788119 (-) | False | LOC110520238 |
| XM_036974651.1 | mRNA | upstream | 381257 | 55779503 ~ 55821242 (-) | False | LOC110520238 |
| XM_021597406.2 | mRNA | upstream | 390155 | 55788401 ~ 55792175 (-) | False | LOC110520238 |
| XM_036974648.1 | mRNA | upstream | 390155 | 55788401 ~ 55821210 (-) | True | LOC110520238 |
| TU312299 | other | downstream | 278678 | 55103494 ~ 55119212 (-) | True | LOC110520227 |
| TU311493 | other | downstream | 715085 | 54679918 ~ 54682805 (-) | True | G274344 |
| TU309646 | other | downstream | 2146806 | 53249926 ~ 53251084 (-) | True | G272713 |
| TU309282 | other | downstream | 2689074 | 52708183 ~ 52708816 (-) | True | LOC110520182 |
| TU307459 | other | downstream | 3797660 | 51597935 ~ 51600230 (-) | True | il1rl1 |
| TU312498 | other | upstream | 11897 | 55410143 ~ 55411487 (-) | False | G275250 |
| TU312500 | other | upstream | 11897 | 55410143 ~ 55411487 (-) | True | G275250 |
| TU315090 | other | upstream | 1872536 | 57270782 ~ 57297762 (-) | True | si:dkey-91i10.3 |
| TU315188 | other | upstream | 2004738 | 57402984 ~ 57403575 (-) | True | G277673 |
| TU315276 | other | upstream | 2186140 | 57584386 ~ 57589183 (-) | True | G277749 |
