Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU312112 |
| length | 844 |
| lncRNA type | intronic |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G274916 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 55446907 ~ 55447994 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU312109 | lncRNA | upstream | 2665 | 55443589 ~ 55444242 (+) | True | G274914 |
| TU312108 | lncRNA | upstream | 5958 | 55439742 ~ 55440949 (+) | True | G274913 |
| TU312090 | lncRNA | upstream | 32523 | 55414101 ~ 55414384 (+) | True | G274895 |
| TU312087 | lncRNA | upstream | 48704 | 55397890 ~ 55398203 (+) | True | G274892 |
| TU312080 | lncRNA | upstream | 59340 | 55387032 ~ 55387567 (+) | True | G274885 |
| TU312113 | lncRNA | downstream | 4856 | 55452850 ~ 55454643 (+) | True | G274917 |
| TU312115 | lncRNA | downstream | 12552 | 55460546 ~ 55466157 (+) | True | G274918 |
| TU312116 | lncRNA | downstream | 18646 | 55466640 ~ 55466950 (+) | True | G274919 |
| TU312117 | lncRNA | downstream | 19965 | 55467959 ~ 55468544 (+) | True | G274920 |
| TU312118 | lncRNA | downstream | 21551 | 55469545 ~ 55469761 (+) | True | G274921 |
| XM_036974635.1 | mRNA | upstream | 35352 | 55405871 ~ 55411555 (+) | True | LOC110520234 |
| XM_036964963.1 | mRNA | upstream | 58185 | 55380671 ~ 55388722 (+) | True | lcmt2 |
| LOC110520231 | mRNA | upstream | 72049 | 55371759 ~ 55374858 (+) | False | LOC110520231 |
| XM_036974624.1 | mRNA | upstream | 91257 | 55157443 ~ 55355650 (+) | False | kcnh3 |
| XM_036974619.1 | mRNA | upstream | 401864 | 55032850 ~ 55045043 (+) | False | LOC110520225 |
| XM_021597403.2 | mRNA | downstream | 293703 | 55741697 ~ 55779314 (+) | False | rftn2 |
| XM_021597404.2 | mRNA | downstream | 293709 | 55741703 ~ 55779314 (+) | True | rftn2 |
| XM_021597402.2 | mRNA | downstream | 344365 | 55792359 ~ 55800630 (+) | True | LOC110520236 |
| XM_021597413.2 | mRNA | downstream | 385749 | 55833743 ~ 55838543 (+) | False | LOC110520240 |
| XM_021597411.2 | mRNA | downstream | 385750 | 55833744 ~ 55849324 (+) | False | LOC110520240 |
| TU312074 | other | upstream | 71381 | 55374546 ~ 55375526 (+) | True | LOC110520231 |
| TU312073 | other | upstream | 71898 | 55374546 ~ 55375009 (+) | False | LOC110520231 |
| TU311754 | other | upstream | 571792 | 54874399 ~ 54875115 (+) | False | G274592 |
| TU310076 | other | upstream | 1605290 | 53841264 ~ 53841617 (+) | True | G273094 |
| TU309978 | other | upstream | 1788224 | 53657461 ~ 53658683 (+) | True | G273004 |
| TU312821 | other | downstream | 452200 | 55900194 ~ 55900743 (+) | True | G275542 |
| TU312833 | other | downstream | 467335 | 55915329 ~ 55916133 (+) | False | G275553 |
| TU312838 | other | downstream | 467518 | 55915512 ~ 55916133 (+) | False | G275553 |
| TU312836 | other | downstream | 467750 | 55915744 ~ 55916133 (+) | False | G275553 |
| TU314786 | other | downstream | 1816573 | 57264567 ~ 57264892 (+) | True | G277296 |
