Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU315833 |
| length | 238 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G278288 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 58036759 ~ 58036996 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU315664 | lncRNA | upstream | 4525 | 58032002 ~ 58032234 (+) | True | G278126 |
| TU315507 | lncRNA | upstream | 248940 | 57787540 ~ 57787819 (+) | True | G277971 |
| TU315455 | lncRNA | upstream | 281754 | 57754774 ~ 57755005 (+) | True | G277922 |
| TU315453 | lncRNA | upstream | 283065 | 57753425 ~ 57753694 (+) | True | G277920 |
| TU315429 | lncRNA | upstream | 299912 | 57736631 ~ 57736847 (+) | True | G277896 |
| TU316068 | lncRNA | downstream | 309114 | 58346110 ~ 58401360 (+) | True | G278514 |
| TU316118 | lncRNA | downstream | 381649 | 58418645 ~ 58418867 (+) | True | G278563 |
| TU315842 | lncRNA | downstream | 422680 | 58459676 ~ 58470598 (+) | True | LOC110504354 |
| TU316484 | lncRNA | downstream | 435329 | 58472325 ~ 58472565 (+) | True | G278909 |
| TU316509 | lncRNA | downstream | 453703 | 58490699 ~ 58490900 (+) | True | G278934 |
| XR_005051240.1 | mRNA | upstream | 57954 | 57976065 ~ 57978805 (+) | True | LOC118964187 |
| NM_001165088.2 | mRNA | upstream | 66920 | 57951099 ~ 57969839 (+) | True | ralb |
| XM_021597471.2 | mRNA | upstream | 447532 | 57571220 ~ 57589227 (+) | False | LOC110520283 |
| XM_021597472.2 | mRNA | upstream | 447532 | 57571220 ~ 57589227 (+) | False | LOC110520283 |
| XM_036974780.1 | mRNA | upstream | 485577 | 57499517 ~ 57551182 (+) | False | clasp1a |
| XM_036965026.1 | mRNA | downstream | 2861 | 58039857 ~ 58470590 (+) | False | LOC110504354 |
| XM_021597491.2 | mRNA | downstream | 899481 | 58936477 ~ 58948624 (+) | True | pofut2 |
| XM_021597492.2 | mRNA | downstream | 924644 | 58961640 ~ 59064792 (+) | True | abca12 |
| XR_005039918.1 | mRNA | downstream | 1056148 | 59093144 ~ 59094205 (+) | True | LOC118944557 |
| XR_002470749.2 | mRNA | downstream | 1476449 | 59513445 ~ 59515061 (+) | True | LOC110505376 |
| TU315509 | other | upstream | 246427 | 57789734 ~ 57790332 (+) | True | G277973 |
| TU314786 | other | upstream | 771867 | 57264567 ~ 57264892 (+) | True | G277296 |
| TU312833 | other | upstream | 2120626 | 55915329 ~ 55916133 (+) | False | G275553 |
| TU317976 | other | downstream | 2015720 | 60052716 ~ 60054417 (+) | False | G280315 |
| TU317977 | other | downstream | 2015720 | 60052716 ~ 60054417 (+) | True | G280315 |
| TU318844 | other | downstream | 2250392 | 60287388 ~ 60290567 (+) | True | G281141 |
| TU319365 | other | downstream | 2703243 | 60740239 ~ 60757350 (+) | True | G281591 |
| TU319499 | other | downstream | 2854528 | 60891524 ~ 60893778 (+) | False | G281714 |
