RNA id: TU322363



Basic Information


Item Value
RNA id TU322363
length 308
lncRNA type intronic
GC content 0.45
exon number 3
gene id G284258
representative False

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 62918506 ~ 62919245 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gatcactcacctcggattagactaagagcttctagatatcaggacagagatcactcacctcggattagacaaagagcttctagatatcaggacagagatcactacctcggattagacaaagagcttctggatatcaggacagagatcactacctcggattagacaaagagcttctggatatcaggacagagatcactcacctcggattagacaaagagcttctggatatcaggacagagatcactcacctcggattagactaagagcttctagatatcaggacagagatcactcacctcggattagac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU322347 lncRNA downstream 15366 62902316 ~ 62903140 (-) True G284244
TU322323 lncRNA downstream 49045 62868822 ~ 62869461 (-) True G284220
TU322316 lncRNA downstream 49766 62866587 ~ 62868740 (-) False G284218
TU322320 lncRNA downstream 50160 62866337 ~ 62868346 (-) False G284218
TU322318 lncRNA downstream 50160 62866587 ~ 62868346 (-) True G284218
TU322375 lncRNA upstream 14035 62933280 ~ 62936135 (-) True G284267
TU322581 lncRNA upstream 151381 63070626 ~ 63071625 (-) True G284448
TU322585 lncRNA upstream 162109 63081354 ~ 63081556 (-) True G284452
TU322586 lncRNA upstream 163784 63083029 ~ 63083228 (-) True G284453
TU322590 lncRNA upstream 168706 63087951 ~ 63089637 (-) True G284457
XM_021597620.2 mRNA downstream 59511 62855879 ~ 62858995 (-) True LOC110520358
XM_036974883.1 mRNA downstream 64592 62841460 ~ 62853914 (-) True LOC110520356
XM_021597617.2 mRNA downstream 64624 62841460 ~ 62853882 (-) False LOC110520356
XM_036974884.1 mRNA downstream 64881 62841460 ~ 62853625 (-) False LOC110520356
XM_021597618.2 mRNA downstream 77409 62832908 ~ 62841097 (-) True LOC110520357
XM_021597622.2 mRNA upstream 91889 63011134 ~ 63025281 (-) True LOC110520360
XM_021597623.2 mRNA upstream 109633 63028878 ~ 63056733 (-) True LOC110520361
XM_036974898.1 mRNA upstream 180829 63100074 ~ 63115360 (-) True chmp2ba
XM_036965051.1 mRNA upstream 245049 63164294 ~ 63167048 (-) True LOC118944692
XM_036974896.1 mRNA upstream 347873 63267118 ~ 63280956 (-) False epsti1
TU322065 other downstream 203329 62714575 ~ 62715177 (-) True G284018
TU315276 other downstream 5329323 57584386 ~ 57589183 (-) True G277749
TU315188 other downstream 5514931 57402984 ~ 57403575 (-) True G277673
TU315090 other downstream 5620744 57270782 ~ 57297762 (-) True si:dkey-91i10.3
TU312500 other downstream 7507019 55410143 ~ 55411487 (-) True G275250
TU324819 other upstream 2050304 64969549 ~ 64970755 (-) True G286522
TU324898 other upstream 2095014 65014259 ~ 65029736 (-) True G286580
TU324968 other upstream 2135455 65054700 ~ 65055211 (-) False G286638
TU324969 other upstream 2135455 65054700 ~ 65075985 (-) True G286638
TU325334 other upstream 2315935 65235180 ~ 65235908 (-) True G286953

Expression Profile