RNA id: TU322433



Basic Information


Item Value
RNA id TU322433
length 432
RNA type TUCP
GC content 0.44
exon number 2
gene id G284313
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 63016326 ~ 63022591 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


atccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcacagagagcatcatgaagaacaagggacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctgaccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcacagatctacagctgaggtgggagactctgtccataggacaacaatcag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU322294 lncRNA upstream 80229 62933377 ~ 62936097 (+) True G284206
TU322286 lncRNA upstream 97088 62918481 ~ 62919238 (+) True G284198
TU322251 lncRNA upstream 152598 62862746 ~ 62863728 (+) True G284174
TU322165 lncRNA upstream 183912 62832079 ~ 62832414 (+) True G284096
TU322164 lncRNA upstream 184689 62831419 ~ 62831637 (+) True G284095
TU322466 lncRNA downstream 44358 63066949 ~ 63067154 (+) True G284345
TU322467 lncRNA downstream 44634 63067225 ~ 63067470 (+) True G284346
TU322476 lncRNA downstream 53157 63075748 ~ 63076164 (+) True G284355
TU322487 lncRNA downstream 74395 63096986 ~ 63097218 (+) True G284366
TU322475 lncRNA downstream 102217 63124808 ~ 63125815 (+) False LOC110520364
XM_036974891.1 mRNA upstream 8407 62947318 ~ 63007919 (+) False LOC110520359
XM_036974892.1 mRNA upstream 8407 62947318 ~ 63007919 (+) True LOC110520359
XR_005051352.1 mRNA upstream 155828 62858213 ~ 62860498 (+) True LOC118964307
XM_021597616.2 mRNA upstream 203245 62783246 ~ 62813081 (+) False LOC110520355
XM_036965040.1 mRNA upstream 303586 62705451 ~ 62712740 (+) False LOC110504398
XR_002472972.2 mRNA downstream 91076 63113667 ~ 63119407 (+) True LOC110520363
XM_021597625.2 mRNA downstream 101789 63124380 ~ 63129015 (+) False LOC110520364
XM_021597627.2 mRNA downstream 150645 63173236 ~ 63204595 (+) False LOC110520366
XM_021597626.2 mRNA downstream 150652 63173243 ~ 63204595 (+) False LOC110520366
XM_021597628.2 mRNA downstream 150652 63173243 ~ 63204595 (+) False LOC110520366
TU321897 other upstream 309356 62706331 ~ 62706970 (+) True LOC110504398
TU320883 other upstream 607469 62367614 ~ 62408857 (+) True LOC110520346
TU320785 other upstream 819375 62193604 ~ 62196951 (+) True LOC110520339
TU320641 other upstream 1054851 61957388 ~ 61961475 (+) True G282707
TU319833 other upstream 1979221 61033766 ~ 61037105 (+) True G281996
TU322474 other downstream 103299 63125890 ~ 63128958 (+) True LOC110520364
TU322683 other downstream 244528 63267119 ~ 63312394 (+) False G284537
TU322754 other downstream 368340 63390931 ~ 63391284 (+) True G284599
TU323169 other downstream 683977 63706568 ~ 63722064 (+) False G284986
TU323188 other downstream 720415 63743006 ~ 63745493 (+) False G285001

Expression Profile