RNA id: TU322586



Basic Information


Item Value
RNA id TU322586
length 200
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G284453
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 63083029 ~ 63083228 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


tacaAATAGAACTATGGTTCCaaaacctgtaggtaggtaggactgggttctgaatGGAGTGTTCAGAGCTTCTGATCTTTTCTATAACTGGTAAGGAACATAATATATGGTCTAttcttggcatgtaggtttctcacttacgggtggcacaaattgggatatggggaggggaatgggcaaggtatatgcaaattaaatac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU322585 lncRNA downstream 1473 63081354 ~ 63081556 (-) True G284452
TU322581 lncRNA downstream 11404 63070626 ~ 63071625 (-) True G284448
TU322375 lncRNA downstream 146894 62933280 ~ 62936135 (-) True G284267
TU322363 lncRNA downstream 163784 62918506 ~ 62919245 (-) False G284258
TU322590 lncRNA upstream 4723 63087951 ~ 63089637 (-) True G284457
TU322591 lncRNA upstream 6575 63089803 ~ 63090207 (-) True G284458
TU322605 lncRNA upstream 48044 63131272 ~ 63131493 (-) True G284472
TU322607 lncRNA upstream 49085 63132313 ~ 63132556 (-) True G284474
TU322614 lncRNA upstream 57884 63141112 ~ 63141319 (-) True G284481
XM_021597623.2 mRNA downstream 26296 63028878 ~ 63056733 (-) True LOC110520361
XM_021597622.2 mRNA downstream 57748 63011134 ~ 63025281 (-) True LOC110520360
XM_036974886.1 mRNA downstream 139511 62869748 ~ 62943518 (-) True LOC110504409
XM_021597620.2 mRNA downstream 224034 62855879 ~ 62858995 (-) True LOC110520358
XM_036974883.1 mRNA downstream 229115 62841460 ~ 62853914 (-) True LOC110520356
XM_036974898.1 mRNA upstream 16846 63100074 ~ 63115360 (-) True chmp2ba
XM_036965051.1 mRNA upstream 81066 63164294 ~ 63167048 (-) True LOC118944692
XM_036974896.1 mRNA upstream 183890 63267118 ~ 63280956 (-) False epsti1
XM_036974893.1 mRNA upstream 183890 63267118 ~ 63282962 (-) False epsti1
XM_036974897.1 mRNA upstream 183890 63267118 ~ 63282967 (-) False epsti1
TU322065 other downstream 367852 62714575 ~ 62715177 (-) True G284018
TU315276 other downstream 5493846 57584386 ~ 57589183 (-) True G277749
TU315188 other downstream 5679454 57402984 ~ 57403575 (-) True G277673
TU315090 other downstream 5785267 57270782 ~ 57297762 (-) True si:dkey-91i10.3
TU312500 other downstream 7671542 55410143 ~ 55411487 (-) True G275250
TU324819 other upstream 1886321 64969549 ~ 64970755 (-) True G286522
TU324898 other upstream 1931031 65014259 ~ 65029736 (-) True G286580
TU324968 other upstream 1971472 65054700 ~ 65055211 (-) False G286638
TU324969 other upstream 1971472 65054700 ~ 65075985 (-) True G286638
TU325334 other upstream 2151952 65235180 ~ 65235908 (-) True G286953

Expression Profile