RNA id: TU322591



Basic Information


Item Value
RNA id TU322591
length 405
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G284458
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 63089803 ~ 63090207 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cttcatgcatcgcgccgacagaaacaaacatctctctggtaagaagaaggccaggtgtgtatgccttatgattaacgagacgtggtgtgatcataataacatacaggaactcaagtccttttgttcacctgacctagaattccttacaatcaaatgtcgaccacaTTATCTGCCAAGAGAATTCTCTgcgatcataatcacagtcgtgtatatcccaCTCCCAATCAGACACAtcaacggccctgaaagaacttcattttactctatgtaaactggaaaccacatatcctgaggctgcgtTTATTGTACCTGGGGATTTTAACAGGGCTCCCTAAATTTGATCAGCATATTgaatgcgcgacccgggctggcaaaaccctggatcattgttattctaacttatAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU322590 lncRNA downstream 166 63087951 ~ 63089637 (-) True G284457
TU322586 lncRNA downstream 6575 63083029 ~ 63083228 (-) True G284453
TU322585 lncRNA downstream 8247 63081354 ~ 63081556 (-) True G284452
TU322581 lncRNA downstream 18178 63070626 ~ 63071625 (-) True G284448
TU322375 lncRNA downstream 153668 62933280 ~ 62936135 (-) True G284267
TU322605 lncRNA upstream 41065 63131272 ~ 63131493 (-) True G284472
TU322607 lncRNA upstream 42106 63132313 ~ 63132556 (-) True G284474
TU322614 lncRNA upstream 50905 63141112 ~ 63141319 (-) True G284481
TU322823 lncRNA upstream 68209 63158416 ~ 63158710 (-) True G284666
TU322826 lncRNA upstream 72355 63162562 ~ 63162795 (-) True G284669
XM_021597623.2 mRNA downstream 33070 63028878 ~ 63056733 (-) True LOC110520361
XM_021597622.2 mRNA downstream 64522 63011134 ~ 63025281 (-) True LOC110520360
XM_036974886.1 mRNA downstream 146285 62869748 ~ 62943518 (-) True LOC110504409
XM_021597620.2 mRNA downstream 230808 62855879 ~ 62858995 (-) True LOC110520358
XM_036974883.1 mRNA downstream 235889 62841460 ~ 62853914 (-) True LOC110520356
XM_036974898.1 mRNA upstream 9867 63100074 ~ 63115360 (-) True chmp2ba
XM_036965051.1 mRNA upstream 74087 63164294 ~ 63167048 (-) True LOC118944692
XM_036974896.1 mRNA upstream 176911 63267118 ~ 63280956 (-) False epsti1
XM_036974893.1 mRNA upstream 176911 63267118 ~ 63282962 (-) False epsti1
XM_036974897.1 mRNA upstream 176911 63267118 ~ 63282967 (-) False epsti1
TU322065 other downstream 374626 62714575 ~ 62715177 (-) True G284018
TU315276 other downstream 5500620 57584386 ~ 57589183 (-) True G277749
TU315188 other downstream 5686228 57402984 ~ 57403575 (-) True G277673
TU315090 other downstream 5792041 57270782 ~ 57297762 (-) True si:dkey-91i10.3
TU312500 other downstream 7678316 55410143 ~ 55411487 (-) True G275250
TU324819 other upstream 1879342 64969549 ~ 64970755 (-) True G286522
TU324898 other upstream 1924052 65014259 ~ 65029736 (-) True G286580
TU324968 other upstream 1964493 65054700 ~ 65055211 (-) False G286638
TU324969 other upstream 1964493 65054700 ~ 65075985 (-) True G286638
TU325334 other upstream 2144973 65235180 ~ 65235908 (-) True G286953

Expression Profile