RNA id: TU322605



Basic Information


Item Value
RNA id TU322605
length 222
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G284472
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 63131272 ~ 63131493 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gggaggaggtgagggccctcagagtgtgatgtcaggaaaataacctcacactcaatgtcaacaaaacaaaggagatggtcgtggacttcaggaaacagcagagggagcagccccctatccacatcgacgggacagtagtggagaaggtggaaagttttaagttcctcggcgtacacatcactgacaaactgaaatggtccacccacacagacagtgtggtga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU322591 lncRNA downstream 41065 63089803 ~ 63090207 (-) True G284458
TU322590 lncRNA downstream 41635 63087951 ~ 63089637 (-) True G284457
TU322586 lncRNA downstream 48044 63083029 ~ 63083228 (-) True G284453
TU322585 lncRNA downstream 49716 63081354 ~ 63081556 (-) True G284452
TU322581 lncRNA downstream 59647 63070626 ~ 63071625 (-) True G284448
TU322607 lncRNA upstream 820 63132313 ~ 63132556 (-) True G284474
TU322614 lncRNA upstream 9619 63141112 ~ 63141319 (-) True G284481
TU322823 lncRNA upstream 26923 63158416 ~ 63158710 (-) True G284666
TU322826 lncRNA upstream 31069 63162562 ~ 63162795 (-) True G284669
TU322889 lncRNA upstream 138974 63270467 ~ 63272608 (-) True G284729
XM_036974898.1 mRNA downstream 15912 63100074 ~ 63115360 (-) True chmp2ba
XM_021597623.2 mRNA downstream 74539 63028878 ~ 63056733 (-) True LOC110520361
XM_021597622.2 mRNA downstream 105991 63011134 ~ 63025281 (-) True LOC110520360
XM_036974886.1 mRNA downstream 187754 62869748 ~ 62943518 (-) True LOC110504409
XM_021597620.2 mRNA downstream 272277 62855879 ~ 62858995 (-) True LOC110520358
XM_036965051.1 mRNA upstream 32801 63164294 ~ 63167048 (-) True LOC118944692
XM_036974896.1 mRNA upstream 135625 63267118 ~ 63280956 (-) False epsti1
XM_036974893.1 mRNA upstream 135625 63267118 ~ 63282962 (-) False epsti1
XM_036974897.1 mRNA upstream 135625 63267118 ~ 63282967 (-) False epsti1
XM_036974895.1 mRNA upstream 135625 63267118 ~ 63282971 (-) False epsti1
TU322065 other downstream 416095 62714575 ~ 62715177 (-) True G284018
TU315276 other downstream 5542089 57584386 ~ 57589183 (-) True G277749
TU315188 other downstream 5727697 57402984 ~ 57403575 (-) True G277673
TU315090 other downstream 5833510 57270782 ~ 57297762 (-) True si:dkey-91i10.3
TU312500 other downstream 7719785 55410143 ~ 55411487 (-) True G275250
TU324819 other upstream 1838056 64969549 ~ 64970755 (-) True G286522
TU324898 other upstream 1882766 65014259 ~ 65029736 (-) True G286580
TU324968 other upstream 1923207 65054700 ~ 65055211 (-) False G286638
TU324969 other upstream 1923207 65054700 ~ 65075985 (-) True G286638
TU325334 other upstream 2103687 65235180 ~ 65235908 (-) True G286953

Expression Profile