RNA id: TU323897



Basic Information


Item Value
RNA id TU323897
length 391
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G285651
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 64230884 ~ 64231337 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


taccctacattattcatctcatatgtacatgtatacactgtactctatatcatctactgcatctttatgtaatacatgtatcactagccactttaaactatgccactttgtttacattactcatctcatatgtatatactgtactcgataccatctactgcatcttgcctatgccgttctgtaccatcactcattcatatatccttatgtacatattctttatccctttacacttgtgtgtataagcacaagcatttcgctacacttgcattaacatctgctaacaatgtgtatgtgacaaatgtgTATgcaatgtgtatgtgtatgcaatgtgcaatgtgtatgtgacacctctagtggtgtgggggctgtgctttggcaaagtgggtgg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU323829 lncRNA upstream 54911 64175771 ~ 64175973 (+) True G285583
TU323827 lncRNA upstream 55796 64174730 ~ 64175088 (+) True G285581
TU323400 lncRNA upstream 155367 64061621 ~ 64075517 (+) True G285195
TU323377 lncRNA upstream 158900 64030669 ~ 64071984 (+) True G285173
TU323376 lncRNA upstream 159984 64029306 ~ 64070900 (+) True G285172
TU323937 lncRNA downstream 33217 64264554 ~ 64264764 (+) True G285691
TU323963 lncRNA downstream 47613 64278950 ~ 64279921 (+) True G285717
TU324028 lncRNA downstream 87199 64318536 ~ 64318745 (+) True G285781
TU324030 lncRNA downstream 89400 64320737 ~ 64320992 (+) True G285783
TU324056 lncRNA downstream 107859 64339196 ~ 64344064 (+) True G285808
XM_021597663.2 mRNA upstream 256408 63972679 ~ 63974476 (+) True LOC110520383
XM_021583204.2 mRNA upstream 330691 63894665 ~ 63900193 (+) True LOC110504443
XR_005039920.1 mRNA upstream 341673 63888258 ~ 63889211 (+) True LOC118944562
XM_021597641.2 mRNA upstream 548642 63625840 ~ 63682242 (+) False gtf2f2b
XM_021597662.2 mRNA downstream 149254 64380591 ~ 64382791 (+) True LOC110520382
XM_036974921.1 mRNA downstream 623403 64854740 ~ 64861974 (+) False zgc:152951
XM_036974919.1 mRNA downstream 623405 64854742 ~ 64861974 (+) False zgc:152951
XM_021597671.2 mRNA downstream 623562 64854899 ~ 64861974 (+) False zgc:152951
XM_036974920.1 mRNA downstream 623893 64855230 ~ 64861974 (+) False zgc:152951
TU323408 other upstream 146902 64071432 ~ 64083982 (+) True G285203
TU323188 other upstream 485391 63743006 ~ 63745493 (+) False G285001
TU323192 other upstream 485391 63743006 ~ 63745493 (+) True G285001
TU323169 other upstream 508820 63706568 ~ 63722064 (+) False G284986
TU322754 other upstream 839600 63390931 ~ 63391284 (+) True G284599
TU324010 other downstream 75175 64306512 ~ 64307360 (+) True G285763
TU325026 other downstream 877919 65109256 ~ 65109637 (+) True G286679
TU325057 other downstream 930054 65161391 ~ 65166580 (+) True LOC110520396
TU325080 other downstream 1029108 65260445 ~ 65285556 (+) True zmym2
TU325972 other downstream 1803083 66034420 ~ 66036202 (+) True LOC118964312

Expression Profile