RNA id: TU324112



Basic Information


Item Value
RNA id TU324112
length 305
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G285863
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 64383134 ~ 64383438 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ccagatcaggagcctgctagatttgtggttttatgggacaatgttagttttcaccgggctgttctggtccaaaactggtttgccacccatccacaatttgtagttttgtacctacccccatattcaccttttctaaatcccatagaggaattcttctcagcctggcgctggaaagtgtatgaatgccaaccctatgcccgcatgccgcttctccaggcaatggaggacgcatgtggggacatagaggttgcctctgtccaagattggatacgccatgctaggagatacttccctcgatgtttggc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU324096 lncRNA downstream 10356 64372572 ~ 64372778 (-) True G285848
TU324094 lncRNA downstream 11694 64370708 ~ 64371440 (-) True G285846
TU324090 lncRNA downstream 13652 64369172 ~ 64369482 (-) True G285842
TU324085 lncRNA downstream 21263 64361472 ~ 64361871 (-) True G285837
TU324051 lncRNA downstream 46795 64336138 ~ 64336339 (-) True G285804
TU324331 lncRNA upstream 50287 64433725 ~ 64434020 (-) True G286066
TU324336 lncRNA upstream 55247 64438685 ~ 64439026 (-) True G286071
TU324316 lncRNA upstream 102417 64485855 ~ 64486815 (-) True LOC110520379
TU324391 lncRNA upstream 170350 64553788 ~ 64554048 (-) True G286125
TU324397 lncRNA upstream 182375 64565813 ~ 64566035 (-) True G286131
XM_036974914.1 mRNA downstream 208858 63911999 ~ 64174276 (-) True LOC110520380
XM_036964596.1 mRNA downstream 478916 63901468 ~ 63904218 (-) False LOC110505395
XM_036964597.1 mRNA downstream 478916 63901468 ~ 63904218 (-) True LOC110505395
XM_036964580.1 mRNA downstream 478920 63901468 ~ 63904214 (-) False LOC110505395
XM_036964595.1 mRNA downstream 478921 63901468 ~ 63904213 (-) False LOC110505395
XM_036974916.1 mRNA upstream 102351 64485789 ~ 64641565 (-) False LOC110520379
XM_036974917.1 mRNA upstream 102351 64485789 ~ 64641565 (-) False LOC110520379
XM_021597673.2 mRNA upstream 469065 64852503 ~ 64855851 (-) True LOC110520388
XM_021597667.2 mRNA upstream 478588 64862026 ~ 64883035 (-) False LOC110520386
XM_021597666.2 mRNA upstream 478588 64862026 ~ 64890987 (-) False LOC110520386
TU322065 other downstream 1667957 62714575 ~ 62715177 (-) True G284018
TU315276 other downstream 6793951 57584386 ~ 57589183 (-) True G277749
TU315188 other downstream 6979559 57402984 ~ 57403575 (-) True G277673
TU315090 other downstream 7085372 57270782 ~ 57297762 (-) True si:dkey-91i10.3
TU312500 other downstream 8971647 55410143 ~ 55411487 (-) True G275250
TU324819 other upstream 586111 64969549 ~ 64970755 (-) True G286522
TU324898 other upstream 630821 65014259 ~ 65029736 (-) True G286580
TU324968 other upstream 671262 65054700 ~ 65055211 (-) False G286638
TU324969 other upstream 671262 65054700 ~ 65075985 (-) True G286638
TU325334 other upstream 851742 65235180 ~ 65235908 (-) True G286953

Expression Profile