RNA id: TU324397



Basic Information


Item Value
RNA id TU324397
length 223
lncRNA type intronic
GC content 0.53
exon number 1
gene id G286131
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 64565813 ~ 64566035 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


cagacagagatagacagggacagacagggacagacagggacagacagatacagacagagacagacagagacagacagatgcagacaggggcagactgagacagacagagacagacagagacagacagatgcagacagggacagacatagacagacagagacagatacagccggacagagacggacagagacagacagagacagacagggctggacagagacag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU324391 lncRNA downstream 11765 64553788 ~ 64554048 (-) True G286125
TU324316 lncRNA downstream 78998 64485855 ~ 64486815 (-) True LOC110520379
TU324336 lncRNA downstream 126787 64438685 ~ 64439026 (-) True G286071
TU324331 lncRNA downstream 131793 64433725 ~ 64434020 (-) True G286066
TU324112 lncRNA downstream 182375 64383134 ~ 64383438 (-) True G285863
TU324398 lncRNA upstream 205 64566240 ~ 64566445 (-) True G286132
TU324402 lncRNA upstream 6055 64572090 ~ 64572345 (-) True G286136
TU324404 lncRNA upstream 17451 64583486 ~ 64586498 (-) True G286138
TU324405 lncRNA upstream 18044 64584079 ~ 64584380 (-) True G286139
TU324501 lncRNA upstream 145666 64711701 ~ 64712152 (-) True G286230
XM_036974914.1 mRNA downstream 391537 63911999 ~ 64174276 (-) True LOC110520380
XM_036964596.1 mRNA downstream 661595 63901468 ~ 63904218 (-) False LOC110505395
XM_036964597.1 mRNA downstream 661595 63901468 ~ 63904218 (-) True LOC110505395
XM_036964580.1 mRNA downstream 661599 63901468 ~ 63904214 (-) False LOC110505395
XM_036964595.1 mRNA downstream 661600 63901468 ~ 63904213 (-) False LOC110505395
XM_021597673.2 mRNA upstream 286468 64852503 ~ 64855851 (-) True LOC110520388
XM_021597667.2 mRNA upstream 295991 64862026 ~ 64883035 (-) False LOC110520386
XM_021597666.2 mRNA upstream 295991 64862026 ~ 64890987 (-) False LOC110520386
XM_036974918.1 mRNA upstream 296499 64862534 ~ 64890987 (-) True LOC110520386
XM_036965063.1 mRNA upstream 318303 64884338 ~ 64895983 (-) True LOC118944694
TU322065 other downstream 1850636 62714575 ~ 62715177 (-) True G284018
TU315276 other downstream 6976630 57584386 ~ 57589183 (-) True G277749
TU315188 other downstream 7162238 57402984 ~ 57403575 (-) True G277673
TU315090 other downstream 7268051 57270782 ~ 57297762 (-) True si:dkey-91i10.3
TU312500 other downstream 9154326 55410143 ~ 55411487 (-) True G275250
TU324819 other upstream 403514 64969549 ~ 64970755 (-) True G286522
TU324898 other upstream 448224 65014259 ~ 65029736 (-) True G286580
TU324968 other upstream 488665 65054700 ~ 65055211 (-) False G286638
TU324969 other upstream 488665 65054700 ~ 65075985 (-) True G286638
TU325334 other upstream 669145 65235180 ~ 65235908 (-) True G286953

Expression Profile