RNA id: TU324501


Basic Information

Item Value
RNA id TU324501
length 230
lncRNA type inter_gene
GC content 0.47
exon number 2
gene id G286230
representative True

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 64711701 ~ 64712152 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggtgaggaacactgcagtgatgttttacagtaagccaggtgaggaacactgctgtgatgttttacagtaagccaggtgaggaacactgctgtgatgttttacagtaagccaggtgaggaacactgcagtgatgttttacagtaagccaggtgaggaacactgcagtgatgttttacagtaagccaggtgaggaacactgcagtgatgttttacagtaagccaggtgagga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU324404 lncRNA downstream 125203 64583486 ~ 64586498 (-) True G286138
TU324405 lncRNA downstream 127321 64584079 ~ 64584380 (-) True G286139
TU324402 lncRNA downstream 139356 64572090 ~ 64572345 (-) True G286136
TU324398 lncRNA downstream 145256 64566240 ~ 64566445 (-) True G286132
TU324397 lncRNA downstream 145666 64565813 ~ 64566035 (-) True G286131
TU324509 lncRNA upstream 6258 64718410 ~ 64718766 (-) True G286238
TU324518 lncRNA upstream 19525 64731677 ~ 64731886 (-) True G286247
TU324524 lncRNA upstream 24767 64736919 ~ 64737209 (-) True G286253
TU324563 lncRNA upstream 57645 64769797 ~ 64770026 (-) True G286292
TU324570 lncRNA upstream 65512 64777664 ~ 64777937 (-) True G286299
XM_036974916.1 mRNA downstream 70136 64485789 ~ 64641565 (-) False LOC110520379
XM_036974917.1 mRNA downstream 70136 64485789 ~ 64641565 (-) False LOC110520379
XM_036974914.1 mRNA downstream 537425 63911999 ~ 64174276 (-) True LOC110520380
XM_036964596.1 mRNA downstream 807483 63901468 ~ 63904218 (-) False LOC110505395
XM_036964597.1 mRNA downstream 807483 63901468 ~ 63904218 (-) True LOC110505395
XM_021597673.2 mRNA upstream 140351 64852503 ~ 64855851 (-) True LOC110520388
XM_021597667.2 mRNA upstream 149874 64862026 ~ 64883035 (-) False LOC110520386
XM_021597666.2 mRNA upstream 149874 64862026 ~ 64890987 (-) False LOC110520386
XM_036974918.1 mRNA upstream 150382 64862534 ~ 64890987 (-) True LOC110520386
XM_036965063.1 mRNA upstream 172186 64884338 ~ 64895983 (-) True LOC118944694
TU322065 other downstream 1996524 62714575 ~ 62715177 (-) True G284018
TU315276 other downstream 7122518 57584386 ~ 57589183 (-) True G277749
TU315188 other downstream 7308126 57402984 ~ 57403575 (-) True G277673
TU315090 other downstream 7413939 57270782 ~ 57297762 (-) True si:dkey-91i10.3
TU312500 other downstream 9300214 55410143 ~ 55411487 (-) True G275250
TU324819 other upstream 257397 64969549 ~ 64970755 (-) True G286522
TU324898 other upstream 302107 65014259 ~ 65029736 (-) True G286580
TU324968 other upstream 342548 65054700 ~ 65055211 (-) False G286638
TU324969 other upstream 342548 65054700 ~ 65075985 (-) True G286638
TU325334 other upstream 523028 65235180 ~ 65235908 (-) True G286953

Expression Profile