RNA id: TU324524



Basic Information


Item Value
RNA id TU324524
length 291
lncRNA type inter_gene
GC content 0.47
exon number 1
gene id G286253
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 64736919 ~ 64737209 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


aagtatttgatcacctaccaaccagtaagaattccggctctcacagacctgttagtttttctttaagaagcccccctgttctccactcattacctgtattaactgcacctgtttgaactcgttacctgtataaaagacacctgtccacacactcaatcaaacagaccccaacctctccacaatggccaagaccagagagctgtgtaaggacatcaggggtaaaattgtagacctgcacaaggctgggatgggctacaggacaataggcaagcagcttggtgagaaggcaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU324518 lncRNA downstream 5033 64731677 ~ 64731886 (-) True G286247
TU324509 lncRNA downstream 18153 64718410 ~ 64718766 (-) True G286238
TU324501 lncRNA downstream 24767 64711701 ~ 64712152 (-) True G286230
TU324404 lncRNA downstream 150421 64583486 ~ 64586498 (-) True G286138
TU324405 lncRNA downstream 152539 64584079 ~ 64584380 (-) True G286139
TU324563 lncRNA upstream 32588 64769797 ~ 64770026 (-) True G286292
TU324570 lncRNA upstream 40455 64777664 ~ 64777937 (-) True G286299
TU324708 lncRNA upstream 46224 64783433 ~ 64783809 (-) False G286426
TU324710 lncRNA upstream 46224 64783433 ~ 64784851 (-) False G286426
TU324709 lncRNA upstream 46798 64784007 ~ 64784709 (-) True G286426
XM_036974916.1 mRNA downstream 95354 64485789 ~ 64641565 (-) False LOC110520379
XM_036974917.1 mRNA downstream 95354 64485789 ~ 64641565 (-) False LOC110520379
XM_036974914.1 mRNA downstream 562643 63911999 ~ 64174276 (-) True LOC110520380
XM_036964596.1 mRNA downstream 832701 63901468 ~ 63904218 (-) False LOC110505395
XM_021597673.2 mRNA upstream 115294 64852503 ~ 64855851 (-) True LOC110520388
XM_021597667.2 mRNA upstream 124817 64862026 ~ 64883035 (-) False LOC110520386
XM_021597666.2 mRNA upstream 124817 64862026 ~ 64890987 (-) False LOC110520386
XM_036974918.1 mRNA upstream 125325 64862534 ~ 64890987 (-) True LOC110520386
XM_036965063.1 mRNA upstream 147129 64884338 ~ 64895983 (-) True LOC118944694
TU322065 other downstream 2021742 62714575 ~ 62715177 (-) True G284018
TU315276 other downstream 7147736 57584386 ~ 57589183 (-) True G277749
TU315188 other downstream 7333344 57402984 ~ 57403575 (-) True G277673
TU315090 other downstream 7439157 57270782 ~ 57297762 (-) True si:dkey-91i10.3
TU312500 other downstream 9325432 55410143 ~ 55411487 (-) True G275250
TU324819 other upstream 232340 64969549 ~ 64970755 (-) True G286522
TU324898 other upstream 277050 65014259 ~ 65029736 (-) True G286580
TU324968 other upstream 317491 65054700 ~ 65055211 (-) False G286638
TU324969 other upstream 317491 65054700 ~ 65075985 (-) True G286638
TU325334 other upstream 497971 65235180 ~ 65235908 (-) True G286953

Expression Profile