RNA id: TU324708



Basic Information


Item Value
RNA id TU324708
length 203
lncRNA type inter_gene
GC content 0.37
exon number 2
gene id G286426
representative False

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 64783433 ~ 64784851 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


atcatgagtagaCTAGTTATAGTTGGCTAGGTAACCAATACCTCATGAGTAGACTAGTTATAGTTGGCTAGGTaaccaatacatcatgagtagactagttatagttggctaggtaaccaatacatcatgagtagaCTAGCTATAGTTGGCTAGGTAACCAATACATAATGAGTTAGACTAGCTATAGTTGGCTAGGTAACCAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU324570 lncRNA downstream 5496 64777664 ~ 64777937 (-) True G286299
TU324563 lncRNA downstream 13407 64769797 ~ 64770026 (-) True G286292
TU324524 lncRNA downstream 46224 64736919 ~ 64737209 (-) True G286253
TU324518 lncRNA downstream 51547 64731677 ~ 64731886 (-) True G286247
TU324509 lncRNA downstream 64667 64718410 ~ 64718766 (-) True G286238
TU324709 lncRNA upstream 198 64784007 ~ 64784709 (-) True G286426
TU324753 lncRNA upstream 107296 64891105 ~ 64928286 (-) True G286463
TU324817 lncRNA upstream 185426 64969235 ~ 64969459 (-) True G286520
TU324820 lncRNA upstream 187449 64971258 ~ 64971597 (-) True G286523
TU324833 lncRNA upstream 194437 64978246 ~ 64978524 (-) True G286536
XM_036974916.1 mRNA downstream 141868 64485789 ~ 64641565 (-) False LOC110520379
XM_036974917.1 mRNA downstream 141868 64485789 ~ 64641565 (-) False LOC110520379
XM_036974914.1 mRNA downstream 609157 63911999 ~ 64174276 (-) True LOC110520380
XM_036964596.1 mRNA downstream 879215 63901468 ~ 63904218 (-) False LOC110505395
XM_021597673.2 mRNA upstream 68694 64852503 ~ 64855851 (-) True LOC110520388
XM_021597667.2 mRNA upstream 78217 64862026 ~ 64883035 (-) False LOC110520386
XM_021597666.2 mRNA upstream 78217 64862026 ~ 64890987 (-) False LOC110520386
XM_036974918.1 mRNA upstream 78725 64862534 ~ 64890987 (-) True LOC110520386
XM_036965063.1 mRNA upstream 100529 64884338 ~ 64895983 (-) True LOC118944694
TU322065 other downstream 2068256 62714575 ~ 62715177 (-) True G284018
TU315276 other downstream 7194250 57584386 ~ 57589183 (-) True G277749
TU315188 other downstream 7379858 57402984 ~ 57403575 (-) True G277673
TU315090 other downstream 7485671 57270782 ~ 57297762 (-) True si:dkey-91i10.3
TU312500 other downstream 9371946 55410143 ~ 55411487 (-) True G275250
TU324819 other upstream 185740 64969549 ~ 64970755 (-) True G286522
TU324898 other upstream 230450 65014259 ~ 65029736 (-) True G286580
TU324968 other upstream 270891 65054700 ~ 65055211 (-) False G286638
TU324969 other upstream 270891 65054700 ~ 65075985 (-) True G286638
TU325334 other upstream 451371 65235180 ~ 65235908 (-) True G286953

Expression Profile