RNA id: TU325738


Basic Information

Item Value
RNA id TU325738
length 201
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G287309
representative True

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 65756337 ~ 65756537 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

cacgcacacacacacacacacacacacatacacatacacatacacatacacatacacatacacatacacacacacacaccttacatacacacacataaacacgtaGCCCTGTTCTTTGGTGACACGTCGGCCTGGCAGGCAGCGCAGGGCACTAAAAAGCTCCAGTGATGAGAAACCTCCCAGTCCTGCTGAGAACCCATC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU325729 lncRNA upstream 10991 65745022 ~ 65745346 (+) True G287300
TU325726 lncRNA upstream 16329 65739779 ~ 65740008 (+) True G287297
TU325724 lncRNA upstream 17378 65738726 ~ 65738959 (+) True G287295
TU325708 lncRNA upstream 29760 65725897 ~ 65726577 (+) True G287281
TU325640 lncRNA upstream 79962 65676108 ~ 65676375 (+) True G287215
TU325763 lncRNA downstream 12655 65769192 ~ 65769561 (+) True G287334
TU325771 lncRNA downstream 54033 65810570 ~ 65812016 (+) True G287342
TU325813 lncRNA downstream 103988 65860525 ~ 65861536 (+) True G287383
TU325913 lncRNA downstream 202649 65959186 ~ 66022656 (+) True G287470
TU325956 lncRNA downstream 267906 66024443 ~ 66024967 (+) True G287513
XM_036974958.1 mRNA upstream 119251 65614185 ~ 65637086 (+) False LOC110520416
XM_021597727.2 mRNA downstream 20659 65777196 ~ 65813495 (+) True LOC110520417
XM_036974967.1 mRNA downstream 271096 66027633 ~ 66036299 (+) False LOC118964312
XM_036974968.1 mRNA downstream 271096 66027633 ~ 66036299 (+) False LOC118964312
XM_036974969.1 mRNA downstream 271096 66027633 ~ 66036299 (+) False LOC118964312
XM_036974971.1 mRNA downstream 271096 66027633 ~ 66036299 (+) False LOC118964312
TU325080 other upstream 470781 65260445 ~ 65285556 (+) True zmym2
TU325057 other upstream 589757 65161391 ~ 65166580 (+) True LOC110520396
TU325026 other upstream 646700 65109256 ~ 65109637 (+) True G286679
TU324010 other upstream 1448977 64306512 ~ 64307360 (+) True G285763
TU323408 other upstream 1672355 64071432 ~ 64083982 (+) True G285203
TU325972 other downstream 277883 66034420 ~ 66036202 (+) True LOC118964312
TU326785 other downstream 793285 66549822 ~ 66550487 (+) True G288252
TU326969 other downstream 974749 66731286 ~ 66733797 (+) False G288430
TU327020 other downstream 1026836 66783373 ~ 66784786 (+) True LOC110505407
TU327305 other downstream 1236634 66993171 ~ 66994131 (+) True G288674

Expression Profile