RNA id: TU325760



Basic Information


Item Value
RNA id TU325760
length 211
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G287331
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 65767995 ~ 65768205 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GAGTAGAGTATAGGACCCACATCTCTCCCATCTCAATTTTCAGTACCATATTTTGCTGAAATATGGGCTGCTTTCATTTTTTCCACAACCCTGAACTTTAATCACTTAACGTTGGCAATGTTTCACCCACATCAAACACGTAATGTTCCACAAGTGTGTTTATATCCTGACCGCAGGGCGCTGTGAATTAATGAAATGGACACCTTAAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU325740 lncRNA downstream 10178 65757593 ~ 65757817 (-) True G287311
TU325737 lncRNA downstream 11963 65755830 ~ 65756032 (-) True G287308
TU325715 lncRNA downstream 35959 65731791 ~ 65732036 (-) True G287287
TU325632 lncRNA downstream 107567 65660207 ~ 65660428 (-) True G287207
TU325631 lncRNA downstream 109084 65658653 ~ 65658911 (-) True G287206
TU326009 lncRNA upstream 1396 65769601 ~ 65771898 (-) True LOC110504474
TU326017 lncRNA upstream 8360 65776565 ~ 65776792 (-) True G287552
TU326022 lncRNA upstream 14706 65782911 ~ 65783661 (-) True G287556
TU326049 lncRNA upstream 53250 65821455 ~ 65822590 (-) True LOC110520418
TU326137 lncRNA upstream 210657 65978862 ~ 65984444 (-) True LOC110520422
XM_036965090.1 mRNA downstream 57429 65709604 ~ 65710566 (-) True LOC110505400
XM_036965082.1 mRNA downstream 70584 65696578 ~ 65697411 (-) True LOC110504464
XM_021597721.2 mRNA downstream 218580 65535814 ~ 65549415 (-) False LOC110520413
LOC110504474 mRNA upstream 1109 65769314 ~ 65777312 (-) False LOC110504474
XM_036974962.1 mRNA upstream 53250 65821455 ~ 65827125 (-) False LOC110520418
XM_021597728.2 mRNA upstream 53250 65821455 ~ 65827337 (-) False LOC110520418
XM_036974964.1 mRNA upstream 53250 65821455 ~ 65840478 (-) False LOC110520418
XM_021597730.2 mRNA upstream 85516 65853721 ~ 65963424 (-) False LOC110520419
TU325523 other downstream 187500 65579791 ~ 65580495 (-) True G287112
TU325443 other downstream 320712 65446825 ~ 65447283 (-) True G287042
TU325373 other downstream 467578 65298207 ~ 65300417 (-) True G286985
TU325334 other downstream 532087 65235180 ~ 65235908 (-) True G286953
TU324969 other downstream 692010 65054700 ~ 65075985 (-) True G286638
TU327202 other upstream 1074466 66842671 ~ 66842881 (-) True G288578
TU328494 other upstream 1858627 67626832 ~ 67633493 (-) True G289678
TU328453 other upstream 2115547 67883752 ~ 67886232 (-) True G289653
TU328904 other upstream 2438385 68206590 ~ 68208395 (-) True si:ch211-214p13.7
TU329440 other upstream 2810898 68579103 ~ 68580707 (-) True G290542

Expression Profile