RNA id: TU326022



Basic Information


Item Value
RNA id TU326022
length 267
lncRNA type antisense_over
GC content 0.51
exon number 2
gene id G287556
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 65782911 ~ 65783661 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTACGCTACTGTATAAGAgatcattattagtgaatgtgtgCGTGTCTTACTGAAGGCGATGTGTGTGGCGTCCTCTAGTGCGTATCCTCTCTTAGTTGTGCTTACCACACAGAAGGCCACAGATGCCATGGCCTGCTCTTTGGCGAGCTGCATGACGTTCCTATAGCAGCTGTACAGTGAGCTCTCAGCAGCCGTCCTGTACTTGGCTTTGTACTTGGGGCCCACCGTGTGGATGATAAAGCGTGCCGCCAGGTTAAAGCCTTTGGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU326017 lncRNA downstream 6119 65776565 ~ 65776792 (-) True G287552
TU326009 lncRNA downstream 11013 65769601 ~ 65771898 (-) True LOC110504474
TU325760 lncRNA downstream 14706 65767995 ~ 65768205 (-) True G287331
TU325740 lncRNA downstream 25094 65757593 ~ 65757817 (-) True G287311
TU325737 lncRNA downstream 26879 65755830 ~ 65756032 (-) True G287308
TU326049 lncRNA upstream 37794 65821455 ~ 65822590 (-) True LOC110520418
TU326137 lncRNA upstream 195201 65978862 ~ 65984444 (-) True LOC110520422
TU326144 lncRNA upstream 210112 65993773 ~ 65997590 (-) True G287664
TU326147 lncRNA upstream 214307 65997968 ~ 66000189 (-) True G287666
TU326186 lncRNA upstream 285476 66069137 ~ 66069360 (-) True G287693
LOC110504474 mRNA downstream 5599 65769314 ~ 65777312 (-) False LOC110504474
XM_036965090.1 mRNA downstream 72345 65709604 ~ 65710566 (-) True LOC110505400
XM_036965082.1 mRNA downstream 85500 65696578 ~ 65697411 (-) True LOC110504464
XM_021597721.2 mRNA downstream 233496 65535814 ~ 65549415 (-) False LOC110520413
XM_036974962.1 mRNA upstream 37794 65821455 ~ 65827125 (-) False LOC110520418
XM_021597728.2 mRNA upstream 37794 65821455 ~ 65827337 (-) False LOC110520418
XM_036974964.1 mRNA upstream 37794 65821455 ~ 65840478 (-) False LOC110520418
XM_021597730.2 mRNA upstream 70060 65853721 ~ 65963424 (-) False LOC110520419
XM_021597731.2 mRNA upstream 70060 65853721 ~ 65963424 (-) False LOC110520419
TU325523 other downstream 202416 65579791 ~ 65580495 (-) True G287112
TU325443 other downstream 335628 65446825 ~ 65447283 (-) True G287042
TU325373 other downstream 482494 65298207 ~ 65300417 (-) True G286985
TU325334 other downstream 547003 65235180 ~ 65235908 (-) True G286953
TU324969 other downstream 706926 65054700 ~ 65075985 (-) True G286638
TU327202 other upstream 1059010 66842671 ~ 66842881 (-) True G288578
TU328494 other upstream 1843171 67626832 ~ 67633493 (-) True G289678
TU328453 other upstream 2100091 67883752 ~ 67886232 (-) True G289653
TU328904 other upstream 2422929 68206590 ~ 68208395 (-) True si:ch211-214p13.7
TU329440 other upstream 2795442 68579103 ~ 68580707 (-) True G290542

Expression Profile