RNA id: TU326888



Basic Information


Item Value
RNA id TU326888
length 361
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G288351
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 66643990 ~ 66644350 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gttaacttgttatggctgcaatcccgttaacgggataattgtcatcaacaaccgctgaattgcatagcgccacattcaatgaatattactaaaaatatttatattcatgaaatcacaagtgcaatataggaaaacacagcttagccttttgttaatccacctgtcgtgtcagattttgaaaatatgctttacagcgaaagcaatccaagcatttgtgtaagtttatcgatcgatCAACAAAACATTAGGTACACTTAGCAtgaagtagcttggtcacgaaaatcagaaaagcaatcaaattaattgtttacctttgatgatcttcggatgtttttcactcacgagactcccagttacacaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU326825 lncRNA downstream 85721 66558011 ~ 66558269 (-) True G288290
TU326823 lncRNA downstream 87786 66555568 ~ 66556204 (-) True G288288
TU326822 lncRNA downstream 88567 66555186 ~ 66555423 (-) True G288287
TU326821 lncRNA downstream 93571 66549701 ~ 66550419 (-) True G288286
TU326819 lncRNA downstream 99100 66544667 ~ 66544890 (-) True G288284
TU326893 lncRNA upstream 2029 66646379 ~ 66646590 (-) True G288356
TU326934 lncRNA upstream 33229 66677579 ~ 66677784 (-) True G288397
TU327071 lncRNA upstream 115624 66759974 ~ 66760307 (-) True G288507
TU327091 lncRNA upstream 145498 66789848 ~ 66790089 (-) True G288525
TU327104 lncRNA upstream 151760 66796110 ~ 66796898 (-) True G288528
XM_036974988.1 mRNA downstream 106095 66490468 ~ 66537895 (-) True LOC110520431
XM_036964598.1 mRNA downstream 168931 66472339 ~ 66475059 (-) True LOC118944607
XR_005051358.1 mRNA downstream 231617 66400067 ~ 66412373 (-) True LOC118964314
XM_021597740.2 mRNA downstream 348103 66268185 ~ 66295887 (-) True LOC110520429
LOC110520425 mRNA downstream 450503 66183116 ~ 66193487 (-) True LOC110520425
XM_036974989.1 mRNA upstream 87887 66732237 ~ 66746474 (-) False LOC110504514
XM_036974991.1 mRNA upstream 87887 66732237 ~ 66746475 (-) False LOC110504514
XM_036974994.1 mRNA upstream 87887 66732237 ~ 66746476 (-) False LOC110504514
XM_036974995.1 mRNA upstream 87887 66732237 ~ 66746476 (-) False LOC110504514
XM_036974992.1 mRNA upstream 87887 66732237 ~ 66746478 (-) False LOC110504514
TU325523 other downstream 1063495 65579791 ~ 65580495 (-) True G287112
TU325443 other downstream 1196707 65446825 ~ 65447283 (-) True G287042
TU325373 other downstream 1343573 65298207 ~ 65300417 (-) True G286985
TU325334 other downstream 1408082 65235180 ~ 65235908 (-) True G286953
TU324969 other downstream 1568005 65054700 ~ 65075985 (-) True G286638
TU327202 other upstream 198321 66842671 ~ 66842881 (-) True G288578
TU328494 other upstream 982482 67626832 ~ 67633493 (-) True G289678
TU328453 other upstream 1239402 67883752 ~ 67886232 (-) True G289653
TU328904 other upstream 1562240 68206590 ~ 68208395 (-) True si:ch211-214p13.7
TU329440 other upstream 1934753 68579103 ~ 68580707 (-) True G290542

Expression Profile