RNA id: TU329099



Basic Information


Item Value
RNA id TU329099
length 261
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G290221
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 68395108 ~ 68395368 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gagacagagagagagacagagagagagacagagagacagagagagacagacagagagagacagacagagagagacagagagagacagagagaaagacagagagagagagagaaagacagagagagagagagagtgagaaagacagagagagtgagagagagagagagagagacagaaagagagacagagagagagagagacagaaagagagacagagagacagaaagagagacagagagacagagagacagagagaaagag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU329092 lncRNA downstream 4474 68390368 ~ 68390634 (-) True G290214
TU329087 lncRNA downstream 7330 68387550 ~ 68387778 (-) True G290209
TU329069 lncRNA downstream 22769 68371957 ~ 68372339 (-) True G290191
TU329067 lncRNA downstream 24251 68368144 ~ 68370857 (-) True G290189
TU329068 lncRNA downstream 28232 68365540 ~ 68366876 (-) True G290190
TU329103 lncRNA upstream 675 68396043 ~ 68396242 (-) True G290225
TU329104 lncRNA upstream 3590 68398958 ~ 68399367 (-) True G290226
TU329347 lncRNA upstream 40467 68435835 ~ 68436078 (-) True G290454
TU329335 lncRNA upstream 53278 68448646 ~ 68449057 (-) True G290442
TU329336 lncRNA upstream 56434 68451802 ~ 68452782 (-) True G290443
XM_021597811.2 mRNA downstream 102358 68278572 ~ 68292750 (-) True LOC110520467
XM_021597810.2 mRNA downstream 102359 68278572 ~ 68292749 (-) False LOC110520467
XM_021597805.2 mRNA downstream 141867 68227272 ~ 68253241 (-) False LOC110520466
XM_021597813.2 mRNA upstream 60093 68455461 ~ 68460579 (-) False LOC110520470
XR_002472988.2 mRNA upstream 189104 68584472 ~ 68586742 (-) True LOC110520471
XM_021597817.2 mRNA upstream 865135 69260503 ~ 69277276 (-) False LOC110520474
XM_036975027.1 mRNA upstream 985099 69380467 ~ 69469698 (-) True LOC110520476
XM_021597820.2 mRNA upstream 1200469 69595837 ~ 69614655 (-) True LOC110520477
TU328904 other downstream 186713 68206590 ~ 68208395 (-) True si:ch211-214p13.7
TU328453 other downstream 508876 67883752 ~ 67886232 (-) True G289653
TU328494 other downstream 761615 67626832 ~ 67633493 (-) True G289678
TU327202 other downstream 1552227 66842671 ~ 66842881 (-) True G288578
TU325523 other downstream 2814613 65579791 ~ 65580495 (-) True G287112
TU329440 other upstream 183735 68579103 ~ 68580707 (-) True G290542
TU329467 other upstream 230964 68626332 ~ 68647620 (-) True G290567
TU329515 other upstream 314999 68710367 ~ 68717385 (-) True G290598
TU329520 other upstream 326440 68721808 ~ 68724914 (-) True G290602
TU329646 other upstream 451243 68846611 ~ 68850854 (-) True G290713

Expression Profile