RNA id: TU329389



Basic Information


Item Value
RNA id TU329389
length 250
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G290495
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 68497235 ~ 68497484 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gatcgatttggaggtggagggtccgtcatggtctggggcggtgtgtcacagcatcatcgaactgagcttgttgtcattgcaggcaatcccaACGCTGTtcgttacaaggaagacatcctcctccctcatgtggtacccttcctgcaggctcatcctgacttGACCCTCCattatgacaatgccaccagccatactgctcgttctgtgcgtgatttttttgcaagacaggaatgtcagtgttctgaaatag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU329371 lncRNA downstream 26451 68470558 ~ 68470784 (-) True G290477
TU329357 lncRNA downstream 40071 68456525 ~ 68457164 (-) True LOC110520470
TU329336 lncRNA downstream 44453 68451802 ~ 68452782 (-) True G290443
TU329335 lncRNA downstream 48178 68448646 ~ 68449057 (-) True G290442
TU329347 lncRNA downstream 61157 68435835 ~ 68436078 (-) True G290454
TU329390 lncRNA upstream 148 68497632 ~ 68497870 (-) True G290496
TU329395 lncRNA upstream 6086 68503570 ~ 68503773 (-) True G290501
TU329403 lncRNA upstream 12900 68510384 ~ 68510739 (-) True G290508
TU329413 lncRNA upstream 29415 68526899 ~ 68527164 (-) True G290518
TU329414 lncRNA upstream 29797 68527281 ~ 68527509 (-) True G290519
XM_021597813.2 mRNA downstream 36656 68455461 ~ 68460579 (-) False LOC110520470
XM_021597811.2 mRNA downstream 204485 68278572 ~ 68292750 (-) True LOC110520467
XM_021597810.2 mRNA downstream 204486 68278572 ~ 68292749 (-) False LOC110520467
XM_021597806.2 mRNA downstream 243994 68227272 ~ 68253241 (-) False LOC110520466
XR_002472988.2 mRNA upstream 86988 68584472 ~ 68586742 (-) True LOC110520471
XM_021597817.2 mRNA upstream 763019 69260503 ~ 69277276 (-) False LOC110520474
XM_036975027.1 mRNA upstream 882983 69380467 ~ 69469698 (-) True LOC110520476
XM_021597820.2 mRNA upstream 1098353 69595837 ~ 69614655 (-) True LOC110520477
XM_021597827.2 mRNA upstream 1143782 69641266 ~ 69644739 (-) False LOC110520480
TU328904 other downstream 288840 68206590 ~ 68208395 (-) True si:ch211-214p13.7
TU328453 other downstream 611003 67883752 ~ 67886232 (-) True G289653
TU328494 other downstream 863742 67626832 ~ 67633493 (-) True G289678
TU327202 other downstream 1654354 66842671 ~ 66842881 (-) True G288578
TU325523 other downstream 2916740 65579791 ~ 65580495 (-) True G287112
TU329440 other upstream 81619 68579103 ~ 68580707 (-) True G290542
TU329467 other upstream 128848 68626332 ~ 68647620 (-) True G290567
TU329515 other upstream 212883 68710367 ~ 68717385 (-) True G290598
TU329520 other upstream 224324 68721808 ~ 68724914 (-) True G290602
TU329646 other upstream 349127 68846611 ~ 68850854 (-) True G290713

Expression Profile