RNA id: TU329591



Basic Information


Item Value
RNA id TU329591
length 404
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G290672
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 68814486 ~ 68814889 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ACGATAAGGATGAAGACGTTTGGAAGTCAAGTGCCTGCGCCGGTCAAGGTCTTCACACCCCACTGCCAGATCCACAACCCCCACTTCGGTCTCTACTGTTGGTTCAAGCTCCACAAAGGCCCCACTCCTCTTCCACTACCCCCACTGCAGGTTTTGGCTCTCTGCAAGTTCATTTAGAGGTGCGGGGCAGGCCGGACACTAGGCGTCaacagagaagagggaggagcagaggaaGGGACACTGAAACCAGCACTGGAACCTGAGGACAGATAGCATAAGATCATTGAAGATTATATGGAGCCAGTACCACCCAGGTTCAGACCCAGACAATCAGTAGTACTACAGTACTCAAACAAACCAGCTGTTTCAGCTCTCCTTCACCACCTCTTTGCTGGGGACACTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU329541 lncRNA downstream 58634 68755410 ~ 68755852 (-) True G290623
TU329516 lncRNA downstream 86940 68722899 ~ 68727546 (-) True G290599
TU329514 lncRNA downstream 98633 68711013 ~ 68715853 (-) True G290597
TU329434 lncRNA downstream 241177 68573110 ~ 68573309 (-) True G290539
TU329429 lncRNA downstream 258384 68555217 ~ 68556102 (-) True G290534
TU329592 lncRNA upstream 123 68815012 ~ 68815236 (-) True G290673
TU329593 lncRNA upstream 441 68815330 ~ 68815638 (-) True G290674
TU329595 lncRNA upstream 1148 68816037 ~ 68817074 (-) True G290676
TU329602 lncRNA upstream 5706 68820595 ~ 68820870 (-) True G290683
TU329605 lncRNA upstream 8163 68823052 ~ 68823271 (-) True G290686
XR_002472988.2 mRNA downstream 227744 68584472 ~ 68586742 (-) True LOC110520471
XM_021597813.2 mRNA downstream 353907 68455461 ~ 68460579 (-) False LOC110520470
XM_021597811.2 mRNA downstream 521736 68278572 ~ 68292750 (-) True LOC110520467
XM_021597810.2 mRNA downstream 521737 68278572 ~ 68292749 (-) False LOC110520467
XM_021597808.2 mRNA downstream 561245 68227272 ~ 68253241 (-) True LOC110520466
XM_021597817.2 mRNA upstream 445614 69260503 ~ 69277276 (-) False LOC110520474
XM_036975027.1 mRNA upstream 565578 69380467 ~ 69469698 (-) True LOC110520476
XM_021597820.2 mRNA upstream 780948 69595837 ~ 69614655 (-) True LOC110520477
XM_021597827.2 mRNA upstream 826377 69641266 ~ 69644739 (-) False LOC110520480
XM_021597828.2 mRNA upstream 834648 69649537 ~ 69675010 (-) False ankrd10b
TU329520 other downstream 89572 68721808 ~ 68724914 (-) True G290602
TU329515 other downstream 97101 68710367 ~ 68717385 (-) True G290598
TU329467 other downstream 166866 68626332 ~ 68647620 (-) True G290567
TU329440 other downstream 233779 68579103 ~ 68580707 (-) True G290542
TU328904 other downstream 606091 68206590 ~ 68208395 (-) True si:ch211-214p13.7
TU329646 other upstream 31722 68846611 ~ 68850854 (-) True G290713
TU330123 other upstream 441116 69256005 ~ 69256544 (-) True G291138
TU330998 other upstream 1165457 69980346 ~ 69996605 (-) True G291901
TU331092 other upstream 1292651 70107540 ~ 70107950 (-) True G291977
TU332000 other upstream 1905147 70720036 ~ 70720591 (-) True G292753

Expression Profile